Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0870 |
Symbol | |
ID | 4256504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 991129 |
End bp | 992334 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638121481 |
Product | AFG1 family ATPase |
Protein accession | YP_736926 |
Protein GI | 114046376 |
COG category | [R] General function prediction only |
COG ID | [COG1485] Predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAATT CCATAGCCTT AACCCCCTCG ATACCTGCGA TTCCCTCCCA ATCTCCGTTG GCTATTTATC AGGCCCAAAT TGGCGCCGGG CTGATTGAGG ATCCCGCGCA GGTGCAGGCA ATACTCGCCT TAGATAAGCT GTATCAGCAG ATTATTGTTC AAACAAATCC TCAGTCACTC AAAGGCTTAT ATCTGTGGGG CGATGTGGGG CGCGGTAAAA CCTTTCTTAT GGATTTGTTC TTTGATGCCC TGCCACAGCA GGGGAAGCTT AGATTGCACT TTCATCGCTT TATGGCGCGG GTGCACCAAG CCTTAAAGCA ACATGCGGGG CAGCGCGATC CCCTTAAGCT GATCGCAAAA AATTTAGCGC AGGAGTGCAA GGTACTCTGT TTCGATGAGT TTTTTGTCTC AGACATAGGT GATGCCATGA TCCTCGCCGG ATTGTTTGAG AGCCTGTTTG CCCAAGGGGT GGTACTGGTC GCCACATCCA ATATTCCCAT CGAGCGCTTA TATGAAAATG GCCTCGCAAG GCACAGATTT TTACCCTGTA TTGCCCAGCT CCTAGCCCAT ACCCAAATGC TGCATCTGAA TGGCGAGCAA GACCACAGGT TGCACACATT GAATAACGAC GAGCCGTCGG CTGAGGCCAT TGCCGCCACC TCAAAGAATA TTGGGCTGAC GGGCACACTG GATTTTGATG GCATTTTTAC GACACTCACT CATGGCGCGC CCGTGATTAA AACCAGTACG CTGCGCATCT GTCAGCGGGA TATTCCCGTC GTGCGCGCCA CTGCTGAAGG GCAACTTCCT TCAGTTGCTT GGTTTGATTT TCATGCCCTG TGCGATGGCC CGCGTTCGCA ACTCGACTAT ATTGAAATTG CGAGTCGATT TAAGGTGTTA ATGCTGAGCA ATGTGTCCAG ACTCGGTGGC GAAGTAAAAG GTTGGATCCG CGCCCGCGGC ACTGAAGATG GCACAGGCGA CAACCAAGCG GCCACCACGG GAGAGCGGCA ACTGTCCTAT GCCGCTAACG ATGACCCAGC GCGGCGTTTT ATCAGCCTTA TCGATGAGTT ATACGATCAA GGGGTGAGAT TATATTTAAG TTGCGACGTG CCACTGAGCG AACTTTACCA AGGCGGCGCC CTCAGTTTTG AATTTCGCCG CACCTATAGT CGACTCATTG AGATGAGCCA GCAAAGAGTC GAGTGA
|
Protein sequence | MTNSIALTPS IPAIPSQSPL AIYQAQIGAG LIEDPAQVQA ILALDKLYQQ IIVQTNPQSL KGLYLWGDVG RGKTFLMDLF FDALPQQGKL RLHFHRFMAR VHQALKQHAG QRDPLKLIAK NLAQECKVLC FDEFFVSDIG DAMILAGLFE SLFAQGVVLV ATSNIPIERL YENGLARHRF LPCIAQLLAH TQMLHLNGEQ DHRLHTLNND EPSAEAIAAT SKNIGLTGTL DFDGIFTTLT HGAPVIKTST LRICQRDIPV VRATAEGQLP SVAWFDFHAL CDGPRSQLDY IEIASRFKVL MLSNVSRLGG EVKGWIRARG TEDGTGDNQA ATTGERQLSY AANDDPARRF ISLIDELYDQ GVRLYLSCDV PLSELYQGGA LSFEFRRTYS RLIEMSQQRV E
|
| |