| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0858 |
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| Symbol | |
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| ID | 4257119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 977518 |
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| End bp | 978207 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638121469 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_736914 |
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| Protein GI | 114046364 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.69065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.706037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCATTC TGAACAAAAT TTTAACAGCG TTTCGCGGTG GTGCCACCGA AGTTGGCCAA
AGCATCGTAG ACGCAAACTC AACTCGAATT TTCGAACAGG AAATCCGTGA TGCCGAGAAA
CACTTAACCA ACGCCAAGCG CGAACTGACC GATGTAATGG CGAAAGAAAT GCAAGCCAGC
CGCGAAATTG ACCGCTTAAA GCGTTCTATC GCCGAGCATG AAGGCTATGT AGCCCAAGCA
TTAGACAAAG GCAATGAAAC CTTAGCCATT GAAGTGGCTG AAAAAATTGC ACAATTGGAG
CAAGAGCTGG CAGAGCAGCA AAGCGCCAAC GACAGCTTTA GCGCCCATGC ACTGCGCCTG
AAAGACTTAG TGAAGAAGAC CGAGCGTCAA CTGTCTGATT ATCAACGTCA GTTAAGCATG
GTTAAAACCA CTGAGAGCGT ACAAAAGGCG ACGGCGACCA TTACCGACTC TTTTGCCTCA
AGCAACTCTA AGCTGCTGAA TGCCAAAGAT TCATTAGAGC GCATTAAGGC GCGTCAACAA
CAGTTTGACG ACAGATTGAA AGCCGCTGAA ACCCTAGCCG AAGAAGGCAG CGATAAGTCA
TTGCAGGCCA AATTAGCCGA AGCTGGCATA GGTGAGCAAA AATCCAATGC CAACGCCGTG
CTCGAACGTA TCAAGGCACG TAAAAGCTAA
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| Protein sequence | MGILNKILTA FRGGATEVGQ SIVDANSTRI FEQEIRDAEK HLTNAKRELT DVMAKEMQAS
REIDRLKRSI AEHEGYVAQA LDKGNETLAI EVAEKIAQLE QELAEQQSAN DSFSAHALRL
KDLVKKTERQ LSDYQRQLSM VKTTESVQKA TATITDSFAS SNSKLLNAKD SLERIKARQQ
QFDDRLKAAE TLAEEGSDKS LQAKLAEAGI GEQKSNANAV LERIKARKS
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