Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0721 |
Symbol | |
ID | 4255163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 834074 |
End bp | 835015 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638121332 |
Product | phage capsid scaffolding |
Protein accession | YP_736778 |
Protein GI | 114046228 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0634164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGC AAACTGGCTG GGTAATCGCA GCAACCGAAG GCGCAACCGT CGACGGTCGC ACTATCACCA AGCAGTGGAT TGAAGACATG GCCGCCCAGT ATTCGGCTGA AGAATACACC GCCATGATTT GGCCTGAGCA CTTCCGCTCA AACTGGGGCC CGTTTGAGGG CAAAAACTGG GGAACAGTCG ATGAAGTAAA AGCTTCAACC ACGGGCGGCA AACTACGCCT ATACGTCAAG TTAACCGCAA ACGACTATCT GCTAGAAGCC AACAAAGACG GCCAAAAGCT GTTTATGTCA ATCGAAGTAA ATACCGATTA CAAAGGCACA GGTAAAGCCT ACTTACAAGG GCTTGCGGTA ACCGACTCCC CAGCATCATC CGGCACATCA CGCCTTAAAT TTTCAATTGG TGAAACCCAA TATGATCACG AAGTCAGCCA GCTAGAAGAA TTACTCAGCA CTGACTTTAT CAAAGATACC TCAGCAAACA CCGAAAACTA CTCAGCCAAG GAAAAAGGCT TACTTGCCGC AGTGATAGAC CTCTTCAAAA AACACCTAAC GCCAGAACCT GAACAGGACG CGGCAACCGT CACCACCGAG GATGAACCGA TGAACAAAGA ACAATTTGAC GCCCTAATGG GCAAGTTTGA CTCATTTGGC ACCAAGTTGA ATGAGCTAGA AACCAAGGTC GCCGCCTTCG GTAAACCGCC AGAAGCCGAC AAAAAAGACG ACGTAACAGT CGATGATAAA GGCGACAAAA CAGGTGACGA CAAAGGCGCA GCAGGCATCA CCGCTGAGCA GTTCAGCAAA CTTGAAACCA TGTTAACAGG CTTTAGCGAC AAGCTTGGCG CAATGGAAAC CAAGTTCAAC AAATTAAGCG CCGAAGTGCC AGGGCAAGAG CCAAACCCAG CGGGCAAAGG CGACGACTTT ACAGTGGTTT AA
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Protein sequence | MGKQTGWVIA ATEGATVDGR TITKQWIEDM AAQYSAEEYT AMIWPEHFRS NWGPFEGKNW GTVDEVKAST TGGKLRLYVK LTANDYLLEA NKDGQKLFMS IEVNTDYKGT GKAYLQGLAV TDSPASSGTS RLKFSIGETQ YDHEVSQLEE LLSTDFIKDT SANTENYSAK EKGLLAAVID LFKKHLTPEP EQDAATVTTE DEPMNKEQFD ALMGKFDSFG TKLNELETKV AAFGKPPEAD KKDDVTVDDK GDKTGDDKGA AGITAEQFSK LETMLTGFSD KLGAMETKFN KLSAEVPGQE PNPAGKGDDF TVV
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