| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0702 |
|---|
| Symbol | |
|---|
| ID | 4256879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 822232 |
|---|
| End bp | 822795 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 638121313 |
|---|
| Product | phage regulatory CII family protein |
|---|
| Protein accession | YP_736759 |
|---|
| Protein GI | 114046209 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000290373 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTATAGCA AACACGCGGG CATACAAGCA GCCAGCAGCA GCCAGATAAA AGCGGCACAT
CAACCGCATG TGGCGGGCGC GCTAAGGCAA TTTGCAGATA GCGAAGAACT GAGCGAAGTC
GCCAACGCGG CCAACATCAG CAAACCGCAA ATGCTGCGCA ATAAGCTGCT ACTTAACCAG
CCACACCAGT TAAGCATCCA CGAAGCCGTG GACATTGCCA AGGTAAGCGG CAATCGCTGC
ATTATCGACG GCATGCTGCT TGAGCTGGGC TGCGTGCCAT CGGTGCCAGT GGCAGAGCTA
GCCAATAGTG AACGCCTATC ACTGACCGAC CGCGCGTTAG AAATCACCGC CAATTCAGCC
CGTTTGGGCG CCATCGCTCT GGACATTAAA GCCCGTCGCC GCGTTAACGA GCGCATGCGC
CATGAAGTGG TTAAGCGTGC CAGTTTGGTA ATGAGCGAAT TAGCCATTTT TGTGCACGAC
GTTGAACAAA AGTTCCAAGC CGTACCCGTG TTATCAGTGG CATTCGATGC CATGCAAACC
ATGCCCATGC CGGGCGTGAT GTAA
|
|---|
| Protein sequence | MYSKHAGIQA ASSSQIKAAH QPHVAGALRQ FADSEELSEV ANAANISKPQ MLRNKLLLNQ
PHQLSIHEAV DIAKVSGNRC IIDGMLLELG CVPSVPVAEL ANSERLSLTD RALEITANSA
RLGAIALDIK ARRRVNERMR HEVVKRASLV MSELAIFVHD VEQKFQAVPV LSVAFDAMQT
MPMPGVM
|
|---|
| |