Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0699 |
Symbol | |
ID | 4256876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 820623 |
End bp | 821138 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638121310 |
Product | hypothetical protein |
Protein accession | YP_736756 |
Protein GI | 114046206 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.385809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00025421 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAATGG TTAAGTGCAA AGAGTGTGGA AAAGAGGTTT CAAGCAAAGC AGATAAATGC CCTCATTGCG GCATATCTAG CCCAGCCTCT AAACCAGGTG ATGCTATAAA AGGATTTTTA TTGATCTTTG TGGTTAGCGC CGTTGCGGTT GCGACATGCT CTGATGATGA CAAAAAACCT GTGAGTGTCG ATGCTAAGCC ACAAGTAAGT GATGCAGCGT GTATGGAGTC GCTTCAGTGC TGGGGTGAAA AGCACATTAT CAATGCGGCG GTTTATTGTG AAAAGCCGAT TGAACGACTA GCACAATATT CTGTTGAATG GACTGATGGT ATTGGATCAC CAAAGTTTGG CTATTATCGC TGGAAGGATC AGCCTAACGG TTATATCACT TATATCGGCG ATAAACTGAA GTTGCAAAAT GGTTTTGGCG CTTGGAGTAA CTACATCTAC GAATGCGATT TTGACCCGGT AAATAATGTC GTGCTAGATG TTCGAGCAAG CCAAGGTATG CTTTGA
|
Protein sequence | MAMVKCKECG KEVSSKADKC PHCGISSPAS KPGDAIKGFL LIFVVSAVAV ATCSDDDKKP VSVDAKPQVS DAACMESLQC WGEKHIINAA VYCEKPIERL AQYSVEWTDG IGSPKFGYYR WKDQPNGYIT YIGDKLKLQN GFGAWSNYIY ECDFDPVNNV VLDVRASQGM L
|
| |