| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0677 |
|---|
| Symbol | |
|---|
| ID | 4254988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 797498 |
|---|
| End bp | 798658 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638121290 |
|---|
| Product | AFG1 family ATPase |
|---|
| Protein accession | YP_736736 |
|---|
| Protein GI | 114046186 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1485] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000859941 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00165359 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGTAATAT CGACGCAGTT TTTCCGAAGG ATAAAAGAGA ATTATAACGT GCCCCAGTTA
AGCCCTTGGC AGCATTACCA AAAAGATCTT ACTCGTGATG GTTTTTCCCA TGATCCCGCG
CAGGAAATGG CCGTAAAGGC GCTGCAACGC GTCTACGAGG ATTTAACCGC TGCCGAAGCG
CCAAGCTCAT TATTAGGCAA GTTGTTGACC TCCTTTGGCC TTAAGTCTGC GCCTGTCGCG
CCTAATGGAT TGTATCTGTG GGGCGGTGTC GGTCGCGGCA AAACCTATTT GATGGACACT
TTTTTTGATG CGCTGCCAGG CAATCAAAAA CTAAGGGCGC ACTTTCACCG CTTTATGCAT
CAACTGCATT TGGATCTGGA TGCGCTTAAA GGCACCCGCG ATCCTTTGTT AGTGATTGCC
AAACAAATGG CGGCTAAATA TAGAGTCATT TGTTTTGATG AGTTTTTTGT CTCTGATATC
ACCGACGCCA TGTTGCTTGG CACCTTATTC CAAGCCCTCT TTAAAGAAGG TGTGGTATTA
GTCGCCACTT CAAATATTAT TCCCGATGAT TTGTATAAAA ACGGATTGCA ACGGGCGCGA
TTCCTTCCCG CGATCGCCTT GATCAATCAG CATTGTGAAG TACTCAATGT GGATTCGGGT
ATCGACTATC GTCTACGCAC ACTGGAGCAG GCCGAGATTT ATCACCATCC ACTCGATGAA
CAGGCCGATA CTAACTTGCT GCGTTATTTC CGTCAGTTAG CCCCCGAGGC CGAAGTATCA
ACCGACGCGA TTGAGATTGA AGGGCGCGCA ATCAGCATAC GTCAACAGGC GCAAGGCGTG
TTGCTCGCGG ATTTCAGAGC CTTATGTGAT GGTCCCCGTA GTCAGCGGGA TTATATGGAG
CTGGCGCGGA TTTATCATAC CGTGTTGGTG AGTGGCATCG AACAAATGGG CGCGTTTTTA
ACGGGTGATG ATATCGCCAG ACGTTTTTTG GCCATGGTGG ATGAGTTTTA CGAGCGCAAC
GTTAAGTTGA TCGTTTCCGC GCAGGTGCCG CTAGAAGAGA TTTACGCCGA CGGCTTATTG
AGTTTTGAAT TCAGACGTTG TCGCTCACGC TTAATTGAAA TGCAATCCCA CGATTACTTA
AAATCAGAGC ATTTACCTTA G
|
|---|
| Protein sequence | MVISTQFFRR IKENYNVPQL SPWQHYQKDL TRDGFSHDPA QEMAVKALQR VYEDLTAAEA
PSSLLGKLLT SFGLKSAPVA PNGLYLWGGV GRGKTYLMDT FFDALPGNQK LRAHFHRFMH
QLHLDLDALK GTRDPLLVIA KQMAAKYRVI CFDEFFVSDI TDAMLLGTLF QALFKEGVVL
VATSNIIPDD LYKNGLQRAR FLPAIALINQ HCEVLNVDSG IDYRLRTLEQ AEIYHHPLDE
QADTNLLRYF RQLAPEAEVS TDAIEIEGRA ISIRQQAQGV LLADFRALCD GPRSQRDYME
LARIYHTVLV SGIEQMGAFL TGDDIARRFL AMVDEFYERN VKLIVSAQVP LEEIYADGLL
SFEFRRCRSR LIEMQSHDYL KSEHLP
|
|---|
| |