Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0565 |
Symbol | |
ID | 4258000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 661340 |
End bp | 662335 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121179 |
Product | hypothetical protein |
Protein accession | YP_736625 |
Protein GI | 114046075 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTCG CATCTCTGGC TGCATCCTCT CGAACTCAGT CGTCCATGTC AGCTGCCGCT AAGCAACAGG ACTCCCGTAT CTACGCCAGT TTGCCGCAAC TGGTGCGATT GCAGGGACAG ACGACGCAAA TCAAAATGCT TAGTCTGCGT TACTCTCGGG CGCACCTTTC TGGCCGTTAT CAATCGCATC AACGGGGACG TGGGCTGAAC TTTGAGGAGC TGCGCCACTA CCAACTGGGT GATGATATTC GTCAAATGGA TTGGAAGGTC ACCCAGCGCA CGGGTAAGCC CCATGTGCGC AGTTACACCG AAGAGAAAGA TCGCCAAGTG ATCCTCTGCG TTGACCAACG TAGCTCCATG TATTTTGGTT CGGTGAGCCA TATGAAATCC GTCGTGGCCG CCGAGATTGC CGCCTTAATG GGCTGGCTTG CGCTGGCCAA TAATGACAGG GTTGGGCTAT TGATATCCGC GACTCAGCAG CTGCATTGGT GCTCGGCAAA GCGTGGTACG GCGCATTTTT TAATAGGATT AGATAGGCTT ATCCAAGCCA ATCATTCCCT GAGTGCGGCG AGCCGAGATA GCAAACGGGT AAGTTTCGCC CAGTGGATGC AAATTTTAAG TCAGCGCAGC CTCAAAGCCG CAACGCTAGT GATTGTCAGC GACTTTGCCG ATGCCGATAA CCAATCCCTC AAACAGTTAA AGTACCTGCA GCAGCATAAT GATGTGCTGT GTATTTTTAT CTCTGATCCG ATGGAAACCC ATGTGCCGGA GGACAGTGTT AGCAGCACTT GGGTGGTGGG TGATGGCCAA TATCAGTTGG CATTACAGAA GGGGCAACAA ACGGCCGAGG TGAATAAGGC GCTGCAAAAA CAATATCTTG AAAAACAAAC CCAACTCAAA AATCTGATGG CAATGCAGCG TATGCCCTTT ATTGAAATCG GCACTCAAGG CGATCATCTG CTGCAACTGG CTCGAACCCT GAGTGATATC CAATGA
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Protein sequence | MALASLAASS RTQSSMSAAA KQQDSRIYAS LPQLVRLQGQ TTQIKMLSLR YSRAHLSGRY QSHQRGRGLN FEELRHYQLG DDIRQMDWKV TQRTGKPHVR SYTEEKDRQV ILCVDQRSSM YFGSVSHMKS VVAAEIAALM GWLALANNDR VGLLISATQQ LHWCSAKRGT AHFLIGLDRL IQANHSLSAA SRDSKRVSFA QWMQILSQRS LKAATLVIVS DFADADNQSL KQLKYLQQHN DVLCIFISDP METHVPEDSV SSTWVVGDGQ YQLALQKGQQ TAEVNKALQK QYLEKQTQLK NLMAMQRMPF IEIGTQGDHL LQLARTLSDI Q
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