Gene Shewmr7_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0565 
Symbol 
ID4258000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp661340 
End bp662335 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content51% 
IMG OID638121179 
Producthypothetical protein 
Protein accessionYP_736625 
Protein GI114046075 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCG CATCTCTGGC TGCATCCTCT CGAACTCAGT CGTCCATGTC AGCTGCCGCT 
AAGCAACAGG ACTCCCGTAT CTACGCCAGT TTGCCGCAAC TGGTGCGATT GCAGGGACAG
ACGACGCAAA TCAAAATGCT TAGTCTGCGT TACTCTCGGG CGCACCTTTC TGGCCGTTAT
CAATCGCATC AACGGGGACG TGGGCTGAAC TTTGAGGAGC TGCGCCACTA CCAACTGGGT
GATGATATTC GTCAAATGGA TTGGAAGGTC ACCCAGCGCA CGGGTAAGCC CCATGTGCGC
AGTTACACCG AAGAGAAAGA TCGCCAAGTG ATCCTCTGCG TTGACCAACG TAGCTCCATG
TATTTTGGTT CGGTGAGCCA TATGAAATCC GTCGTGGCCG CCGAGATTGC CGCCTTAATG
GGCTGGCTTG CGCTGGCCAA TAATGACAGG GTTGGGCTAT TGATATCCGC GACTCAGCAG
CTGCATTGGT GCTCGGCAAA GCGTGGTACG GCGCATTTTT TAATAGGATT AGATAGGCTT
ATCCAAGCCA ATCATTCCCT GAGTGCGGCG AGCCGAGATA GCAAACGGGT AAGTTTCGCC
CAGTGGATGC AAATTTTAAG TCAGCGCAGC CTCAAAGCCG CAACGCTAGT GATTGTCAGC
GACTTTGCCG ATGCCGATAA CCAATCCCTC AAACAGTTAA AGTACCTGCA GCAGCATAAT
GATGTGCTGT GTATTTTTAT CTCTGATCCG ATGGAAACCC ATGTGCCGGA GGACAGTGTT
AGCAGCACTT GGGTGGTGGG TGATGGCCAA TATCAGTTGG CATTACAGAA GGGGCAACAA
ACGGCCGAGG TGAATAAGGC GCTGCAAAAA CAATATCTTG AAAAACAAAC CCAACTCAAA
AATCTGATGG CAATGCAGCG TATGCCCTTT ATTGAAATCG GCACTCAAGG CGATCATCTG
CTGCAACTGG CTCGAACCCT GAGTGATATC CAATGA
 
Protein sequence
MALASLAASS RTQSSMSAAA KQQDSRIYAS LPQLVRLQGQ TTQIKMLSLR YSRAHLSGRY 
QSHQRGRGLN FEELRHYQLG DDIRQMDWKV TQRTGKPHVR SYTEEKDRQV ILCVDQRSSM
YFGSVSHMKS VVAAEIAALM GWLALANNDR VGLLISATQQ LHWCSAKRGT AHFLIGLDRL
IQANHSLSAA SRDSKRVSFA QWMQILSQRS LKAATLVIVS DFADADNQSL KQLKYLQQHN
DVLCIFISDP METHVPEDSV SSTWVVGDGQ YQLALQKGQQ TAEVNKALQK QYLEKQTQLK
NLMAMQRMPF IEIGTQGDHL LQLARTLSDI Q