| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0478 |
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| Symbol | |
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| ID | 4255605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 541212 |
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| End bp | 544979 |
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| Gene Length | 3768 bp |
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| Protein Length | 1255 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638121092 |
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| Product | MSHA biogenesis protein MshQ |
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| Protein accession | YP_736538 |
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| Protein GI | 114045988 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.233703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.793103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTAGAT GTTTAGCGTT CTTGAATTTA GCGCAACTTA ACAAAGCTCA TTACATGCGA
TGGGTTGCAT CTAACTTGCT GCTATTATTT TATTTTTTTT CATTGCCGTC TGCTTATGCC
GCAATTGATT GTAATAGTGT ATTTCCGGGG CCAATACAAA GTTTTAGCAG TAGCGGTGAG
CTTTATATGC AAAGCAATGC ACTTGTTGAA AATTATAATG CTTTGGACGT TTGCTTTAAA
AAGGTAAAAA ATTTCCATGA AATGAATGCA AGTGCATGTG GTATCGGGAA ATGCCAAATT
ACTGGAACTC CGAGTTTAGC AAGAGCCGCA CCTACGTTTG TCAGTAGTTC TACTTCTGCA
AGCAATGTAG TCGCAAACTG GACTACTCCT GTTGTAGAGC TTGGTACTAC AGTTGGTTAC
GGTCAGCGAT TCGACAGCAG TCGTTGGGAT ATAGGCCAAT TAACTATCAA TACCGGAGGC
AATGTTACTG TATCAGATAC CTATTCAACA TACGTTATAA AAGATCTGAC CTTTTATAAT
TCAGGTACGA TGACCTTAAA AGCTGGTAAA ACTTATATCA TTGATGGAGA TCTCAATCTT
AATTCAGGCA TTTTAAATAT AGTAGGTACG GGTGATACCA AGCTATATAT CAAAGGTAAT
TTTACCATTG CGCTGTCATC AGTTTTTAAT GCACCAACCT CCTTAGACGT ATATGTTGGT
CAAAAACTAG AGTTACAAAG CAATGCTCAG ATTCAAGGTA GTTATTATGT AGCGGATGAT
GCGGTGTTAC AAAATAGTGC GGTATTGATT GGTAGACTAA GCGCTAAAAA TGTCACCCTT
CAAAGTAGTA GTAAGGTCAT TTATGATGCT GGCACACCAC CGCTTCAATG TTTTAACGAT
AATTTCTCTC AGAGTGCCTT AAGTAACGAC TGGGTAGTAT CCCGTAGCAG TGGTTCGTTT
ACTCCTGCTA TTGTCAGTGG CCGTATGCGT TTAACCGAGG CCAAATCCAA TCAATCCACT
GCCTCGACCT ATCAAAGATT ATTCCCCGCA GCCAATAACT TAGTCGAGAT CCAGTTCGAA
CACTATGCCT ATGGCGGTAG TGGTGCCGAC GGTATCGCGG TGGTGTTATC AGATGCGGCC
ATCACCCCCC AGCCTGGCGC TTTTGGTGGG CCTTTAGGTT ATGGCTTTAA ACCCGGTATC
AATGGCTTTG CTGGTGGTTG GTTGGGCGTC GGGATCGATG AGTTTGGTAA CTTCTCCGGC
GAAGGCGGGA GCATAAATCT TTCGGGACAA CGGCGTCAGT CAGTTGCTGT TCGCGGTTCT
GGTTCGGGTA CATCTGGTTA CCGTTATCTG CGTGGGACTT GTAATAATGG CACGACCAAT
ACCAGTGGCA ACTGTTTATC ACCCACGGTC GATGGCAACA ATGTCTCGCC TGCGCACCGC
TATAAAATCA CTATCGACTC GCAGGTCTCG GGTCAGTCGA TGGTGAAGAT TGAACGTAAT
ACAGGTTCGG GGTTTGTCAC CTTAATCCCT GCTTTTAATG CCATAGATCA ACAAGGACAA
GCGGCGACGC CGAGTGATTT CTTGTTGTCG CTTACAGGCT CAACTGGTGG CTCGAATAAC
AACCATGAAA TTGATAACGT TCAAATTTGT GCCTTGAGGT CTAATCCAAT TGGTGCGCAA
ATCGATCATT TTGAGTTTGA CCATACGGGG CAGGGATTAA CCTGTAATCC CGAAACCGTG
ACGATTCGAG CCTGCGCTAA CGCCAGTTGT AGTCAGCTTT TTACTGACCC TTTGACGGCG
ACCTTGTTAC CCGAATCCAC CTCAGAAGGC ATATGGATTG GCGGCAATCA GGTGAGCTTT
AACAATGGCA GCACTCAGTT GCAGCTAAGA CGTAACACCC CTGGCGTTGT GACCTTGGGG
GTAAAAGGTT CGAACCCGAC AACCAAACCT TTAAGTAAAA CCCTTTGCCG TATCGGTAAT
GGGGGGCTGA GTGAAAACAA CTGTTCACTT ACCTTCGCCG ACAGTGGTTT TGTCTTCGAT
GTGCCTGATA AGCGTGCGAA TCGCCCCGAG CAAGTGTTAG TCAAAGCGGT GAAAAAATCC
GATGTGACAC AGCAGTGTGT TCCAAGCTTC CAAAGCCAGA CCAAGACATT GAATTTCTGG
AGCAGTTATC ACACTCCGAG TGCGCCTATT TCGCCAAAAG CCGTCACCAT CAACAATACG
GCCATTGGCA CTTCAAGCGC CTCGCCTACT ACGCTGAATC TGAAGTTTGA TACTAACGGA
CAGGCAAGCA TTTCAGTGAA TTATCCCGAT GCGGGCAAAT TACAACTCGA TGCCCAATAT
ATCGGCAGTG GCAACGAGCA AGGCCTGGTG ATGACAGGCT CGGATCAATT TGTCAGTGTG
CCTGCGGGGT TGTGCGTCAA ACCCGTGGAC GCCAGCGCCA GTTGTCCAAG TGCGGATATG
AGCTGTAATG CCTACCGTAA AGCGGGACAG AATTTCGGTA TGACGGTCCA AGCTATGGCT
TGGGAAGACG ACCGCGATAC GGACTTTTGC TCGGGCAACT TACCTACGCC TAACTTTAGT
GACCAAGCCA TGACACTAAC CAGTAAAGTC TTTGCGCCAA ACATTGCCAG CGGCGGCCAT
GATGGCGCAT TAGGCGTGGC ATCCTATAGT CATGCTATCC AAGCCAATAA CCTTAATAGC
ATCACCAATC AGACGATTAG CGAAGTGGGG GTATTCCAAA TCGCGGCGCA GGCGAGTCCT
AACTACCTTG GGGTGGCCAG CAGCTTAAAT ATTCCGATTG GCTATTCAGC CAATATTGGC
CGCTTTGTGC CCGACAGATT TTTAGTGGGC GATATTTCTG TCGTACCTGC CTGTGGCAGT
TTTAGCTATA TGGATCAACT CTTCCCTATG TCGATGAGCC TCAAAGCCTT AAATATCGGC
GGCGCGGTGA CGCAGAACTA TTTCCCACCA TTCTCCCTCG CGACCGCCAA ATTGGTGGGG
GAGAACAATA ATAATGGTAT CGACTTACAG AGTCGCTTAA GCGCTTTGCC CGTCAATGCG
GCGAGTTGGG TTCAAGGTGT GGCGACTGTC GATGGCACTT ACCGAGCTTA TTTAAACCGA
GTGACCCCGA ATGTGACGAC GAATTTATAT CAAGATGGTC CCTTCGAGCT GCTCGATATT
GGCGTGCAGT TGATGGATAA CGATCCTCGA CCTAATGGAC TTTTTAGCTA TGTGGCATCG
CCTGATATGA ATGCTGCAAC CACGGGTAAT TGCACAAACT GTAATGCCAA AAAAATCACC
TCGCAGATCC TGCGCCACGG CAGGGTGGTG ATGGACAATA CCTATGGTCC AGAAACTGAA
ATCCTCAGGA TGCCGACCCG AGCCGAATAT TGGAATGGGA CTAATTGGGT ATTAAATGGC
GATGATAGCT GCACTATTGC TACCTACAGC CTTGAGTCGC AGGTGGATAA TGCAGGGCTG
GGTTATAACT TTGATCCGGA TTTGACCACA GGGCAGAGCA TTAATCGCTC CGGCGCTACA
TCAGCATTCC AAGCGGGGCA GTTTGATTTG CTGTGGCGAG CGCTCACCTC AAGTGGCAAT
TTATATCGCG GCCAAGTGAC CGCGCCTTTA AATGTACCGA GCTGGTTAGA ATGGTATTGG
GATTGGAATG GGCTCTCCCC AACTAGCTTA TCCGATCCCC GCGCGAGTGC ATTTTTTGGT
CGTTACCGTG GCCATGACAG AATCATCTAC TGGCGAGAAG TTAATTAA
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| Protein sequence | MVRCLAFLNL AQLNKAHYMR WVASNLLLLF YFFSLPSAYA AIDCNSVFPG PIQSFSSSGE
LYMQSNALVE NYNALDVCFK KVKNFHEMNA SACGIGKCQI TGTPSLARAA PTFVSSSTSA
SNVVANWTTP VVELGTTVGY GQRFDSSRWD IGQLTINTGG NVTVSDTYST YVIKDLTFYN
SGTMTLKAGK TYIIDGDLNL NSGILNIVGT GDTKLYIKGN FTIALSSVFN APTSLDVYVG
QKLELQSNAQ IQGSYYVADD AVLQNSAVLI GRLSAKNVTL QSSSKVIYDA GTPPLQCFND
NFSQSALSND WVVSRSSGSF TPAIVSGRMR LTEAKSNQST ASTYQRLFPA ANNLVEIQFE
HYAYGGSGAD GIAVVLSDAA ITPQPGAFGG PLGYGFKPGI NGFAGGWLGV GIDEFGNFSG
EGGSINLSGQ RRQSVAVRGS GSGTSGYRYL RGTCNNGTTN TSGNCLSPTV DGNNVSPAHR
YKITIDSQVS GQSMVKIERN TGSGFVTLIP AFNAIDQQGQ AATPSDFLLS LTGSTGGSNN
NHEIDNVQIC ALRSNPIGAQ IDHFEFDHTG QGLTCNPETV TIRACANASC SQLFTDPLTA
TLLPESTSEG IWIGGNQVSF NNGSTQLQLR RNTPGVVTLG VKGSNPTTKP LSKTLCRIGN
GGLSENNCSL TFADSGFVFD VPDKRANRPE QVLVKAVKKS DVTQQCVPSF QSQTKTLNFW
SSYHTPSAPI SPKAVTINNT AIGTSSASPT TLNLKFDTNG QASISVNYPD AGKLQLDAQY
IGSGNEQGLV MTGSDQFVSV PAGLCVKPVD ASASCPSADM SCNAYRKAGQ NFGMTVQAMA
WEDDRDTDFC SGNLPTPNFS DQAMTLTSKV FAPNIASGGH DGALGVASYS HAIQANNLNS
ITNQTISEVG VFQIAAQASP NYLGVASSLN IPIGYSANIG RFVPDRFLVG DISVVPACGS
FSYMDQLFPM SMSLKALNIG GAVTQNYFPP FSLATAKLVG ENNNNGIDLQ SRLSALPVNA
ASWVQGVATV DGTYRAYLNR VTPNVTTNLY QDGPFELLDI GVQLMDNDPR PNGLFSYVAS
PDMNAATTGN CTNCNAKKIT SQILRHGRVV MDNTYGPETE ILRMPTRAEY WNGTNWVLNG
DDSCTIATYS LESQVDNAGL GYNFDPDLTT GQSINRSGAT SAFQAGQFDL LWRALTSSGN
LYRGQVTAPL NVPSWLEWYW DWNGLSPTSL SDPRASAFFG RYRGHDRIIY WREVN
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