Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0464 |
Symbol | |
ID | 4256680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 528806 |
End bp | 529456 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638121078 |
Product | MSHA biogenesis protein MshJ |
Protein accession | YP_736524 |
Protein GI | 114045974 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCC AATTTGAACA GTTAGCGCAA AAGTTTGATG TTCTCAGCCA GCGCGAGCGC GGGCTTATTG CTATCGCCGT GTTAGTGCTG GTCGCCATGC TGGCCTATCT GCCTATCGAG TCGCTGTGGA AACAACAGTA TTCGACGGCG CAGCAATTAA AAGCCTTAGA GCAAGAAAAC CAGATTTCGA TGCAACAGAT TGATTTATAT CAGCAGCGAC TGGCGATGGA TCCTAATCAG GACTATCGCC AGCGTTTAAA CTTGTTGCAG CAACAGAATC AACAGATTGA TGCTCAGCTT AATGAGCAGA TGGTGGACAT GGTGCCCGCC GATTATATGC CTGAGCTATT AGGTAATCTG CTTGGGCAGG TTCAAGGCAT TAAATTACTC AAGTTTACCT CGGTGACGCC CGTGCCACTC CTTGCCGTGG GTGAAGAGAA AAAGTTAAAT CTCTACAGCC ATGGAATACG TATGAGCTTG GAGGGGGATT ATTTTTCCGT GCTGCGTTTT GTTGAAGCGG TTGAGGCGAT GCCCGACAAA CTTTATTGGA AACGACTCGA CTATAAAGTG GCCGATTACC CTAAAGGGAA AATCGATATC GAGCTTTATA CCTTGAGTAT TAATAAGGAC TTTATCAGTG TCGCTAAATA A
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Protein sequence | MKAQFEQLAQ KFDVLSQRER GLIAIAVLVL VAMLAYLPIE SLWKQQYSTA QQLKALEQEN QISMQQIDLY QQRLAMDPNQ DYRQRLNLLQ QQNQQIDAQL NEQMVDMVPA DYMPELLGNL LGQVQGIKLL KFTSVTPVPL LAVGEEKKLN LYSHGIRMSL EGDYFSVLRF VEAVEAMPDK LYWKRLDYKV ADYPKGKIDI ELYTLSINKD FISVAK
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