| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0424 |
|---|
| Symbol | |
|---|
| ID | 4255656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 483007 |
|---|
| End bp | 483927 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638121038 |
|---|
| Product | dTDP-4-dehydrorhamnose reductase |
|---|
| Protein accession | YP_736484 |
|---|
| Protein GI | 114045934 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACA TCATGGTAAC GGGCGCAACC GGATTACTCG GCAGGGCGGT CGTCAAACAG
TTAACCGCCG CGGGTCATAG GGTGATTGCC ACAGGTTTTA GCCGTGCCGA GGCGGGGATT
CATCGGCTCG ATTTAACCCA AGCCGCCGAG GTCGAAGCTT TTATTGCCCG TGAACAGCCC
GAGGTGATAG TGCACTGCGC CGCCGAGCGT CGCCCCGATG TGTCTGAGCG CTCGCCAGAA
CATGCCTTAG CACTGAATTT GAGCGCCAGC CAAACCTTAG CCGAGGTTGC CAAAACCCAT
CAAGCTTGGC TGCTGTATAT TTCTACCGAC TATGTGTTCG ATGGCACAAC GCCGCCCTAT
GCCGAAGATG CTGAGCCCAA TCCGGTCAAC TTTTATGGCG CGTCTAAATT GCAAGGCGAA
ACCTGTGTGC TGAGCACCGA CAACGGTTTT GCGGTATTAC GCTTACCTAT CCTCTACGGT
GAAGTGACTC AACTGAACGA GTCTGCGGTA TTGGTGTTAA TCAACCAATT GCTGGATGGC
AGACCGCAGC GGGTCGACCA TTGGGCCATT CGTGCGCCAA CATCGACGGC GGATATTGCC
AATGCCATTG CTAAGCTCAT CCAGCGGCAG TTACATGCTG CCGATGTGTC AGGGATTTAC
CATTTTAGTG CCACGCAAAC CATGACTAAG TATCAGATGC TGCTCAGCTT AGGTGAACTG
CTGGGGATTG ATAGCGCGCA TTTACTTCCT GATCAAACCC CTACGGATAG TGCCAAAAGG
CCGCAAGATT GCACCTTAAG TTGTGGGCGT TTAGCCGCCT TGGGGATCTA CTCTGAGTTA
GCGTTTAAGA CAGGGCTAAC TCAGGCACTT AGCCAATCCA GCACGGCACT GGCGGCAGTT
GGCCTTAAGT TTAAGGATTA A
|
|---|
| Protein sequence | MANIMVTGAT GLLGRAVVKQ LTAAGHRVIA TGFSRAEAGI HRLDLTQAAE VEAFIAREQP
EVIVHCAAER RPDVSERSPE HALALNLSAS QTLAEVAKTH QAWLLYISTD YVFDGTTPPY
AEDAEPNPVN FYGASKLQGE TCVLSTDNGF AVLRLPILYG EVTQLNESAV LVLINQLLDG
RPQRVDHWAI RAPTSTADIA NAIAKLIQRQ LHAADVSGIY HFSATQTMTK YQMLLSLGEL
LGIDSAHLLP DQTPTDSAKR PQDCTLSCGR LAALGIYSEL AFKTGLTQAL SQSSTALAAV
GLKFKD
|
|---|
| |