| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0418 |
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| Symbol | |
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| ID | 4256652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 475416 |
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| End bp | 476342 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638121032 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_736478 |
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| Protein GI | 114045928 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCATA CCGCCCGCGC CGCCCAACCT TCCTTCGTGG TTCTCCCCTT GGAAGTGGTT
GATAAACCGA CCGTATTTTC TTTTTTGATC AGCCATTTTT CCCATATTGG CGAAGCGGTT
TGGCGCCAGC GGATCCTCGA TGGCAAAGTG CATTGGCAAG ACGGCAGCTT GATTGGATTA
GATACAGCCT ATCGTCCAAC GGCGAGGGCT TACTACTACC GTGAAGTCCC CGTCGAGGCA
CAAGTCCCGT TCGAGTCGCC GATTTTGTTT CAAGATGACA ATCTTATCTT GGCCTACAAA
CCGCATTTTT TACCCGTCAC CCCAAGCGGC GAGTATGTGA ATGAGTGCCT AGTGCACCGT
TTACGCTTAA GCACTGGGAT CGACACTATC GCCCCTGCCC ATAGGTTAGA CCGGGAAACC
GCAGGCGTTA TTCTGATGAC GACTCGCCCC GAGACGCGAC ATATTTATCA CCAGCTTTTT
GTCGATGATG CGATTCGTAA AGATTATCAA GCGATTGCCA AACTCACTCC AGAGATTATG
GCGCAATATG CCTGTGGCGA ATTAACCTTG CCATTGCATT GGACGGTGAA AAATCGTATG
CAACGCAGCG AGCCGAGTTT CACCATGAAG ATAGTCGAAG GCGAGGCAAA TACGCACTCC
GAGATTAGCT TAGTCGCGGT TAAAGGGGAG TTTGGTTTAT TCGAGTTAAG CCCTATTACT
GGCAAAACTC ACCAGCTACG CGTCCATATG CAAAGCCTGG GTATGCCATT ATTAAATGAT
CGCTTTTATC CGACGTTATA CCCTAAAGGG CCGGATGATT TTACCAAGCC GCTGCAGCTC
TTAGCGCAGC GATTACGTTT TGTTGATCCT ATTACTGGCA ACAAACATGA TGTTCAATGC
GAACATTTGT ATTTGAAAAA TGATTAA
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| Protein sequence | MTHTARAAQP SFVVLPLEVV DKPTVFSFLI SHFSHIGEAV WRQRILDGKV HWQDGSLIGL
DTAYRPTARA YYYREVPVEA QVPFESPILF QDDNLILAYK PHFLPVTPSG EYVNECLVHR
LRLSTGIDTI APAHRLDRET AGVILMTTRP ETRHIYHQLF VDDAIRKDYQ AIAKLTPEIM
AQYACGELTL PLHWTVKNRM QRSEPSFTMK IVEGEANTHS EISLVAVKGE FGLFELSPIT
GKTHQLRVHM QSLGMPLLND RFYPTLYPKG PDDFTKPLQL LAQRLRFVDP ITGNKHDVQC
EHLYLKND
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