Gene Shewmr7_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0413 
Symbol 
ID4256647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp469235 
End bp470155 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content48% 
IMG OID638121027 
Productputative manganese-dependent inorganic pyrophosphatase 
Protein accessionYP_736473 
Protein GI114045923 
COG category[C] Energy production and conversion 
COG ID[COG1227] Inorganic pyrophosphatase/exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.541637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATGT ACGTTGTCGG TCACAAAATC CCCGATTCTG ATTCAATCTG CGGTGCTATC 
GCGTTAGCTT ATTTAAAAAA CCAAATCGGT GAAGAAGCCG TTGCCGCACG TTTAGGTGAG
TTATCACCCG AAACCGCTTT TATTCTGGAG CGTTTTGGCT TTGAAGCGCC AGAATATAAA
ACCAGCTATG CTGGCGAGCA GGTCTACATT GTTGACCACT CAGAACTGAC TCAAGCACCG
GACGATATCG CTCAAGCGAC TATCGTAGGT ATTGTGGATC ACCACAAATT AGGCGATCTG
ACCACTGATA CGCCTTTAGA GTGCTGGATC CGCCCTGTTG GTTGCAGCAA CACAGTCATT
AAGATGATGT ACGACTTCCA CCAAGTTGCC ATCCCTAAAA ATATCGCTGG CATCATGATG
TGCGCCATCC TGAGCGACAC TGTGATCTTC AAATCACCGA CCTGCACTAC AGCCGACATC
CGCTGCGTTG AGGCCTTAGC CGAAATCGCT GGCGTTGAAG ACTTTAAAGC GCTGGGCATG
GAAATGTTCA AGGTAAAATC GGCTGTTGAA GGCACGCCAG CACGCGATCT CGTGATGCGC
GACTTTAAAG ACTTCAACAT GAACGGTAAC TTAGTGGGTA TCGGCCAGTT AGAAGTAATT
GATCTGTCTG TATTTGATTC AATCAAAGCC GAACTGGAAG CCGATATCAA AGCCCTGAAA
GTTGAAGGCA ACCGTCACAG CGTACTGTTA CTGCTGACTG ACATTATGAA AGAAGGCTCA
GAGCTGTTAG TGGTTTCTGA CGATGCCGAT CTGGTCAACC GTGCCTACGG TAAAACCCCA
GTCGATGGCA AAGTATGGTT AGACGGCGTA TTAAGCCGTA AGAAGCAAGT TGTGCCACAA
CTGCAGGCCG CTTTCGCTTA A
 
Protein sequence
MPMYVVGHKI PDSDSICGAI ALAYLKNQIG EEAVAARLGE LSPETAFILE RFGFEAPEYK 
TSYAGEQVYI VDHSELTQAP DDIAQATIVG IVDHHKLGDL TTDTPLECWI RPVGCSNTVI
KMMYDFHQVA IPKNIAGIMM CAILSDTVIF KSPTCTTADI RCVEALAEIA GVEDFKALGM
EMFKVKSAVE GTPARDLVMR DFKDFNMNGN LVGIGQLEVI DLSVFDSIKA ELEADIKALK
VEGNRHSVLL LLTDIMKEGS ELLVVSDDAD LVNRAYGKTP VDGKVWLDGV LSRKKQVVPQ
LQAAFA