Gene Shewmr7_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0396 
Symbol 
ID4256488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp453415 
End bp454425 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content50% 
IMG OID638121010 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_736456 
Protein GI114045906 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATCA TTACCAGTGC CTTCCCTCAG CGCAGAATGC GCCGCATGCG CAAACATGAC 
TTTAGCCGTC GCCTGATGGC TGAGAACCAC CTAACAGTCA ATGACTTGAT CTACCCTATG
TTTGTGCTTG AAGGCACTAA TCGCAGCGAA AAAGTCGCTT CTATGCCAGG GGTTGAACGC
TACTCTATCG ACTTACTGTT AAAAGAAGCC GAAGAGCTAG TTGAACTCGG TATTCCGTTA
ATTGCCCTGT TCCCAGTTAC GCCTGCCGAG AAGAAATCGC TGATGGCAGA AGAAGCCTAC
AATGCCGATG CTTTAGTGCA ACGCGCCGTG CGTGAACTGA AAAAGGCCTT CCCACAACTG
GGTATCATGA CTGACGTGGC CTTAGATCCT TTCACCACCC ACGGTCAAGA CGGCATTATC
GATGAAACAG GCTACATCCT GAATGACATC ACTACAGAGA TCTTAGTGAA ACAAGCACTC
TCCCATGCCG AAGCGGGTGC AGACATTGTT GCCCCGTCGG ACATGATGGA TGGTCGCATC
GGTGCGATTC GCCAAGCGCT CGAAGCCGCT GCCCATGTAA ACACCCAAAT CATGGCCTAT
TCAGCCAAAT ACTCCTCAAG CTACTATGGT CCCTTCCGTG ATGCAGTAGG CTCAGCAGGC
AACCTAAAAG GTGGCAATAA ACATAGCTAT CAAATGGATC CGGCCAACAG CGATGAAGCC
TTGCATGAAG TGGCACTAGA CATCCAAGAA GGCGCAGATA TGGTGATGGT GAAGCCTGGT
ATGCCTTACC TAGATATCGT TCATCGCGTA AAAACCGAAT TAGCCGTGCC TACTTTCGCT
TACCAAGTTA GTGGCGAATA TGCCATGCAT ATGGCGGCCA TTCAAAATGG TTGGTTAGCG
GAAAAGGCTA TCGTCATGGA ATCGCTGCTA TGCTTCAAAC GCGCTGGCGC CGACGGCATC
CTTACCTACT TCGCCAAACG TGCAGCACAG TGGCTAAAAG AAGCTAAATA A
 
Protein sequence
MNIITSAFPQ RRMRRMRKHD FSRRLMAENH LTVNDLIYPM FVLEGTNRSE KVASMPGVER 
YSIDLLLKEA EELVELGIPL IALFPVTPAE KKSLMAEEAY NADALVQRAV RELKKAFPQL
GIMTDVALDP FTTHGQDGII DETGYILNDI TTEILVKQAL SHAEAGADIV APSDMMDGRI
GAIRQALEAA AHVNTQIMAY SAKYSSSYYG PFRDAVGSAG NLKGGNKHSY QMDPANSDEA
LHEVALDIQE GADMVMVKPG MPYLDIVHRV KTELAVPTFA YQVSGEYAMH MAAIQNGWLA
EKAIVMESLL CFKRAGADGI LTYFAKRAAQ WLKEAK