Gene Shewmr7_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0280 
Symbol 
ID4256216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp310715 
End bp311263 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content50% 
IMG OID638120887 
ProductPBP family phospholipid-binding protein 
Protein accessionYP_736342 
Protein GI114045792 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCATT TACATAAGTG GATAGTTGGA ATTGGGTTAT TTACGGCGGT ATTTAGTTCG 
GCGCAGGCCA TGACCTTATC GAGTAAAGAT ATTGGCGAAG GTCAGCAATT ATCGAATCAA
TTTGTTTTTA ATGGTTTTGG CTGTAATGGC GAGAATCTTT CTCCCGAACT CACTTGGCGT
GATGCGCCTA ATGGCACGAA AGCCTATGCG GTGACGGCTT ATGATCCCGA CGCGCCTACG
GGCAGTGGTT GGTGGCATTG GGCCGTTTAC AATATAGGTG GCGATCAACA GCAATTAACC
CAAGGTGCAG GTTCAAAGGC CAATGCCTTA CCTCAAGGGG CGATTGCGCT TAAGAACGAC
TATGGTACAA CCAACTTTGG TGGCGCCTGT CCGCCGCAGG GGCATGGCAT GCACAGATAT
GTCTTTACTG TATGGGCGCT ACCCACGCCA TTAGAGTTAC CTAAGGATGC ATCTCCCGCG
CTGTTAGGCT TTATGCTCAG GTCACAGGCA TTAGGCAGCG CTAAGCTGAC CGCTGTGTAT
CAGCGTTAA
 
Protein sequence
MMHLHKWIVG IGLFTAVFSS AQAMTLSSKD IGEGQQLSNQ FVFNGFGCNG ENLSPELTWR 
DAPNGTKAYA VTAYDPDAPT GSGWWHWAVY NIGGDQQQLT QGAGSKANAL PQGAIALKND
YGTTNFGGAC PPQGHGMHRY VFTVWALPTP LELPKDASPA LLGFMLRSQA LGSAKLTAVY
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