| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0261 |
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| Symbol | |
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| ID | 4256775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 283737 |
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| End bp | 285623 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120868 |
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| Product | LppC family lipoprotein |
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| Protein accession | YP_736323 |
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| Protein GI | 114045773 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAAAAA GCCTGAATAC AACTAAGTTC GTTTCCGTGG CCATTTTATC CGCAGTGTTG
GCGGGTTGCG GCAGCCAAGC GCCCAGCTCA ACCGGTACTG CCCCCACAGT GGCCACCTCT
TTAGCCTCTG CACCATTGGC GCCCAATGTG TATTTAGCAC AGGCCGCGAA TAGCAAAGAT
CCGCAGCAGC GCGATACTAA CCTGCTGCTG GCGGCGCATG CCTATATCAA TGCCAATGAC
TATGCGGCGG CGCAGAAACT GCTGAAGTCG ATGCAGCCAA GCCTGACTCA GACTCCTACT
CTGGTGGCCG AGCATAAATA CCTGACGGCG CGGGTATTAG AGCATACATC GACCTATGTC
GAGGCGCTCA AGACCTTGAG CTATCCAAGC ACTTGGGTTT TACCCGGCTG GCAAATGGCC
GCGTATCATC AATTTAGAGC GCATTTGTTC CAGTTGAATA AGCAACCTAT CGAACAAGTG
CGCGAGCTGA GTTTATTGAC CACCTATTTA CCGCCCGCCG AGGCGAGTGA AGTCAATAAC
CAAATCTGGC AAGTGTTGCA GCCAATGCAT GAGCAAACCC TGCAAACCTT TATCCGCGAT
GCCAACAACC CAGTATTTGC CGGTTGGTTG CAGCTCGCCT ATATCGCCAA ACATTATGCG
GTCGACCCCA ATCAACTGGT TCGTTACTTA GGCGACTGGC AAAAGCAGAA TCCTTATCAT
CCAGCGGCGG CCAAATTGCC GACCGATTTG GATCGGGCGC TCAATGCCAA GCCTTTTATG
CCGAAGAATA TCGCCGTTTT GCTTCCGCTT ACAGGCCAGC GCGCGGGTGC CGCCAACGCG
ATTCGCCAAG GGATTTTAGC CAGCTATTTA GCCAAACCTA ATGAGCAGGT TGCGGTTAAT
TTTTACGATA CCGCCAACGA TGCCGTTGCC GCCTATCAAC AAGCGGTAAA TGCGGGCGCC
GAGTTTATTA TTGGCCCCTT ATTGCCAAAT GAAATCGATC AATTACTGGC ACTGAACAAC
AGTACAAGCC CTGCGACCAG TACGCCATCG GGCTCTGCAC CTACCGCGCC CGCAGCACCG
ACAGCACCAA TCCCGCAGCT ATTTTTGAAT CAAACCGATA AGTTTGTGCC CGATATCAAT
AAGTTCTACT TTGCGCTGTC ACCAGCCCAA GAAGCCGCCG ATGCCGCAAC GCGCATGTAT
CAAGATGGCG TGACTATGCC ATTACTGCTC GCCAGCAACG ATGCCACAGG CAAACGCATG
GCAGAAAGCT TTATCCAAGC CTGGAAAAAG AAAAGCGATA CCCCTATCGA AGTCTATTAC
TACGATGGTG GCGATAAGAT GAAAACCACA GTGCAGGATG CACTCGGAGT CCGCGATAGC
CAAGCCCGTA TCGCACGTAT CAAAGAACTG CTAGGCAGTT CGGTACAGGC CGATTTTCGC
TCGCGCCAAG ATATCGATGC GATTTATATG ATCTCGACGC CGCAGGATTT AACCTTGCTC
AAGGCCTTTA TCGATGTGAA CTTCAGCGTC TTTACTCAGC CAGTGCCGCT GTACACCTCA
AGCCGCAGCC GCATCGACAA CGAATCGAGC CAAACGGCGC AGGATTTAAA TAACCTGACC
ATGAGCGATG CTCCTTGGCT GATGCAAAAC AGTGAAGAAA ACCTGATGGT TAACACTCTA
TGGTCGGGCT GGAATAACGG CCAGAAACGC CTGTTCGTGA TGGGCTATGA TGCCATGGAT
TTGATCAGCA AACTGGCGCA GATGCGCTCA TTCACGGGTT ACCAGTTCAA TGGTCGTAGC
GGCGTGTTAT CCGTCAATCC TGACGGCGTG ATTAACCGCC AATTAAGCTG GGGACGCTAT
CAGAGAGGCA GTTTCCGTCA ACTATGA
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| Protein sequence | MLKSLNTTKF VSVAILSAVL AGCGSQAPSS TGTAPTVATS LASAPLAPNV YLAQAANSKD
PQQRDTNLLL AAHAYINAND YAAAQKLLKS MQPSLTQTPT LVAEHKYLTA RVLEHTSTYV
EALKTLSYPS TWVLPGWQMA AYHQFRAHLF QLNKQPIEQV RELSLLTTYL PPAEASEVNN
QIWQVLQPMH EQTLQTFIRD ANNPVFAGWL QLAYIAKHYA VDPNQLVRYL GDWQKQNPYH
PAAAKLPTDL DRALNAKPFM PKNIAVLLPL TGQRAGAANA IRQGILASYL AKPNEQVAVN
FYDTANDAVA AYQQAVNAGA EFIIGPLLPN EIDQLLALNN STSPATSTPS GSAPTAPAAP
TAPIPQLFLN QTDKFVPDIN KFYFALSPAQ EAADAATRMY QDGVTMPLLL ASNDATGKRM
AESFIQAWKK KSDTPIEVYY YDGGDKMKTT VQDALGVRDS QARIARIKEL LGSSVQADFR
SRQDIDAIYM ISTPQDLTLL KAFIDVNFSV FTQPVPLYTS SRSRIDNESS QTAQDLNNLT
MSDAPWLMQN SEENLMVNTL WSGWNNGQKR LFVMGYDAMD LISKLAQMRS FTGYQFNGRS
GVLSVNPDGV INRQLSWGRY QRGSFRQL
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