| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0220 |
|---|
| Symbol | rplQ |
|---|
| ID | 4255682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 238264 |
|---|
| End bp | 238659 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638120825 |
|---|
| Product | 50S ribosomal protein L17 |
|---|
| Protein accession | YP_736283 |
|---|
| Protein GI | 114045733 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0203] Ribosomal protein L17 |
|---|
| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.827106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00534003 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCATC GTAAGAGTGG TCGTCAACTT AACCGCAACA GCAGCCACCG CCAAGCTATG
TTCCGTAACA TGGCAAGCTC ACTGGTTCGT CATGAGATCA TCAAGACAAC CGTAGCTAAA
GCGAAAGAAC TGCGTCGCGT AGTTGAGCCT CTGATAACAC TTGCTAAGAG TGACAGTGTT
GCAAACCGTC GTTTAGCGTT TGCACGTACT CGCGACGCTG AAGTCGTAGG TAAGTTATTC
ACTGAATTGG GTCCACGTTA CCAGGAACGT CCTGGTGGCT ACACCCGTAT CCTTAAGTGC
GGTTTACGTG CTGGTGATAA AGCCCCAATG GCTTACATCG AGCTAGTAGG TCGTCCAGAA
GCTGCTCAAG CTGTTGAAGT TGAAGCTGCT GAGTAA
|
|---|
| Protein sequence | MRHRKSGRQL NRNSSHRQAM FRNMASSLVR HEIIKTTVAK AKELRRVVEP LITLAKSDSV
ANRRLAFART RDAEVVGKLF TELGPRYQER PGGYTRILKC GLRAGDKAPM AYIELVGRPE
AAQAVEVEAA E
|
|---|
| |