| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0101 |
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| Symbol | |
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| ID | 4255563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 115994 |
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| End bp | 117415 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638120696 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_736164 |
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| Protein GI | 114045614 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCC TAGTACCCGA TACACCCCAA GCCCTGTACC GCGCGCTGCC GTCGATGGAC
AGTCTGCTCG CCGATGCGAT ATTGGCGCCC CTGCTGCAAA GCTATGGTAA AGCGGCGGTA
AAAGCGGCGC TGGATAGCCA GTTACGCACG GCGCGTGAGC TGATTGCCCA GGAGCGACGT
TTACCCGCTT GGTGTGCTAA CCCGTCATTA TTGAACGGAT ATTTGGTTGA TCAATTGTCT
AAGGACTATA GCCATAGTCT AAAACCCGTG TGGAACCTCA CGGGAACCAT ACTGCATACC
AACCTTGGCC GCGCCCAGCA GTCTGAGGCG GCCATTCGTG CCGTAACCTC TGTGATGCGT
TATCCGACGC CGCTGGAATT TGAGTTGGCA GCGGGTGAGC GCGGCCATCG GGATAATGCT
ATTAGTGGGT TAATCCAGCG CCTAACTGGG GCAGAGGCCT GCTGCGTGGT GAATAACAAC
GCCGCTGCTG TGCTGCTGAT GTTGTCGGCG GTGGCGGCGG GTAAAGAAGT GATCGTCTCC
CGCGGCGAGT TGGTGGAAAT TGGCGGCGCC TTTCGCATTC CAGACATTAT GCGCCAAGCG
GGCTGTACCT TAGTGGAAGT CGGCAGCACT AATCGTACTC ACCTCAAGGA CTATGAGCAG
GCGATAACCG AAAATACCGC CGCCATCATG AAGGTGCACA CCAGCAACTA CCATATCAGT
GGTTTTACCG CTTCGGTGGA TGAGGCCAGA TTAGGCCAAC TCTGCCGCGA GCGTGGGGTC
GCGCTGATCT CGGATCTTGG CAGTGGTTCA CTCACCGACT TACGCCGTTT TGGCCTTAAA
CAAGAGCCGA CGCCCCAAGC CATGCTGGCG GATGGGGTCG ATCTGGTTAG CTTCTCCGGC
GATAAACTCC TCGGCGGCCC GCAATCGGGT TTGATTGTCG GCAAACAGAC GCTGATTAAC
AAACTCCAAA GTCATCCGCT CAAGCGTGCA TTGCGCTGTG ACAAGCTGAT TCTCGCGGCG
CTCGAGGCAA CGCTGATCCA CTATCTCAAT CCCGAAACCT TGGATCGGGA ACTGCCGATT
ATGGCTAAGT TTGCCCGCAG CCAAGCAGAG TTACGCCAAA TCGGTGAGCG CCTGCAGCGC
GCCTTAGCGC CGCTGTTTGC CCCGAGCTAT GGCATCGAAT TAGTGGAGTG CCAAACTCAA
GTCGGTAGCG GCTCGCAGCC CGATACCTTT TTACCCTCAA TCGCCCTGTG CTTTAACGCG
CAAGAGGGTG GCAGTCTAAC GCTGCTCGAG CAGCATTTTA AGCAGGCGCA GCGGCCTGTG
ATTGGTCGAA TGACCCAAGA TCAACTTCGT CTCGACCTGC GTGGTATCGA TGATGAGGCC
GAATTGTTAG CCGAACTCAG CACCTTAGGT GTGCAGCTAT GA
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| Protein sequence | MMTLVPDTPQ ALYRALPSMD SLLADAILAP LLQSYGKAAV KAALDSQLRT ARELIAQERR
LPAWCANPSL LNGYLVDQLS KDYSHSLKPV WNLTGTILHT NLGRAQQSEA AIRAVTSVMR
YPTPLEFELA AGERGHRDNA ISGLIQRLTG AEACCVVNNN AAAVLLMLSA VAAGKEVIVS
RGELVEIGGA FRIPDIMRQA GCTLVEVGST NRTHLKDYEQ AITENTAAIM KVHTSNYHIS
GFTASVDEAR LGQLCRERGV ALISDLGSGS LTDLRRFGLK QEPTPQAMLA DGVDLVSFSG
DKLLGGPQSG LIVGKQTLIN KLQSHPLKRA LRCDKLILAA LEATLIHYLN PETLDRELPI
MAKFARSQAE LRQIGERLQR ALAPLFAPSY GIELVECQTQ VGSGSQPDTF LPSIALCFNA
QEGGSLTLLE QHFKQAQRPV IGRMTQDQLR LDLRGIDDEA ELLAELSTLG VQL
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