Gene Shewmr7_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0044 
Symbol 
ID4254937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp52588 
End bp53022 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content41% 
IMG OID638120639 
Productrhodanese domain-containing protein 
Protein accessionYP_736107 
Protein GI114045557 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00248227 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAGAAT ATATCGAATT TTTTAAGGCT CACACTCTGC TAAGTCTGGC TTGGGTGGGT 
TTGTTTGTAA TGCTTGTGGT CAGTGTGATC AAATCGAGCT TTTCAAAAAT CAAAAATGTC
ACTCATCAAG AACTCACTAT TATGGTGAAC CGACAAGACG CTAAAGTCGT GGATGTGCGT
TCAAATGACG AGTTCCGTAA GGGCCATATT GTTGATGCAG TTAATGTTAC GCTCGCGGAT
ATCAAAAATA ATCAGGTTTC AGCCCTTGAA AAGTTCAAAG GCAGTCCCAT TATACTGGTA
TGCAATGCTG GCATGACCTC GTCTCAAGCG GCTCAGCTTT TAAGTAAACA AGGTTTTGAA
AACCTGTATA ACTTGAAAGG TGGTATGGGT GAATGGCAGG CAGCGAATAT GCCTGTTTCA
AAAAGCAAAA GATAA
 
Protein sequence
MQEYIEFFKA HTLLSLAWVG LFVMLVVSVI KSSFSKIKNV THQELTIMVN RQDAKVVDVR 
SNDEFRKGHI VDAVNVTLAD IKNNQVSALE KFKGSPIILV CNAGMTSSQA AQLLSKQGFE
NLYNLKGGMG EWQAANMPVS KSKR