| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3935 |
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| Symbol | gidB |
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| ID | 4254498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4696750 |
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| End bp | 4697370 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120583 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_736055 |
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| Protein GI | 113972262 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.387591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000403371 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGTTATCTG CCCAGTTAGA GGCCTATTTA GCCGAAATTA ATCTGCCCGC CACGGCTGAG
CAGAAAAAAC AACTGCTTGA TTTTGTTGGC ATGCTCAACA AATGGAATAA AGCTTATAAC
TTAACCTCGG TAAGAGATCC TGAGGCGATG CTTGTCCGCC ATATTATGGA CAGCTTAGTG
GTGTCGCCCC ATTTGCAGGG CGAGCGCTTT ATCGATGTGG GTACTGGACC TGGGCTGCCC
GGCATTCCTT TAGCGATTAT GAATCCTGAT AAGACCTTTG TGCTGCTCGA TAGCTTAGGC
AAGCGTATCC GCTTTCAAAA GCAAGTGGCC TTTGAACTCG GGATCCACAA TATTAGTTCG
ATAGAGAGCC GAGTCGAGGC CTATCAACCC GAGCAAAAGT TCGATGGAGT GCTGAGCCGC
GCCTTTGCCT CAATCCATGA TATGTTGACA TGGTGCCATC ACTTGCCTGC CGAGCATGGA
CAATTTTATG CGCTCAAGGG ACAACTGAGT GATGAAGAGA TGCAACAAAT CCCCGCTGGA
TTTGTGGTGA CCGAAACCAT CGAACTCAAA GTGCCTAGAC TCGATGAGCA AAGACATTTA
CTCAAAATAA TCAAAGAATA A
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| Protein sequence | MLSAQLEAYL AEINLPATAE QKKQLLDFVG MLNKWNKAYN LTSVRDPEAM LVRHIMDSLV
VSPHLQGERF IDVGTGPGLP GIPLAIMNPD KTFVLLDSLG KRIRFQKQVA FELGIHNISS
IESRVEAYQP EQKFDGVLSR AFASIHDMLT WCHHLPAEHG QFYALKGQLS DEEMQQIPAG
FVVTETIELK VPRLDEQRHL LKIIKE
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