| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3892 |
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| Symbol | |
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| ID | 4254455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4642823 |
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| End bp | 4643551 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638120537 |
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| Product | hypothetical protein |
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| Protein accession | YP_736012 |
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| Protein GI | 113972219 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGTAA TCCCAATGGC AGGACTAAGT AGTCGATTTT TTAAAGAAGG ATATGAGCAA
CCAAAATATA TGTTACTAGC CCATGGATTA TCGCTGTTTG AGCACTCAGT TAAAAGCTTT
GAAAAATATT TCAAAAGCGA AGAGTTTATT TTTATAGTTC GAGATAGCTA TGAGACTCCT
AATTTTGTAA GAAAAAAATC AGAGATCCTA GGCATAAAAA ACTTCAAAAT AATAGTTCTT
CATGAAAATA CAAAGGGACA GGCTGAGACA GTTTTTCTCG GCTTAAAAGA GATTAACAAA
ACAGAAGAAC CAATCACTAT TTTCAATATA GACACATTTA GACCAGGATT TATATACCCG
GAATTAGAAG CGCTCGGAGA TGGCTACTTA GAAGTATTTC AGGGCGAAGG AGATAACTGG
TCATTTGTGA GAGCAATTTC CAATGAAACA ACGTTGATTG ACTTAACTAC TGAGAAAAAA
CCTATATCCA AATTATGCTG CACTGGGTTG TATTATTTTA AAAGCAGTAA AGATTACATA
GATGCATATA ATAATTACAT ACGTCTCCCT ATAGAAGAAT GGGAAAAGGG AGAACTATAT
GTAGCACCGC TGTATAACTA TCTCATAAGA AAAAATAAAA AAATACATTA TAATTTAATA
TCTAGAGAGG ATGTCATATT TTGCGGAGTC CCTTCGGAAT ATAAAGACTT TCTATCAATA
AATGATTAA
|
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| Protein sequence | MIVIPMAGLS SRFFKEGYEQ PKYMLLAHGL SLFEHSVKSF EKYFKSEEFI FIVRDSYETP
NFVRKKSEIL GIKNFKIIVL HENTKGQAET VFLGLKEINK TEEPITIFNI DTFRPGFIYP
ELEALGDGYL EVFQGEGDNW SFVRAISNET TLIDLTTEKK PISKLCCTGL YYFKSSKDYI
DAYNNYIRLP IEEWEKGELY VAPLYNYLIR KNKKIHYNLI SREDVIFCGV PSEYKDFLSI
ND
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