Gene Shewmr4_3891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3891 
Symbol 
ID4254454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4641261 
End bp4642826 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content32% 
IMG OID638120536 
Producthypothetical protein 
Protein accessionYP_736011 
Protein GI113972218 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTAA TTATGTCTGG TGCATATGTT ACCGAAGATC TTAAAGCTGA ATTCGGAACA 
ATACCACCAG CCTTTCTACC TTTAGGTAAC AGACGGCTAT TTCAGCATCA AATACAAAAA
ATTCCTAAGG GAAAGAGTAT TTACCTTTCC TTACCAGACT CTTATAAAAT TCCTGAAGTG
GACAATTCGT GGCTAGCCGC CCATAACATT AACATTATTC GTACACCAGT AAACCTTTCT
ATCGGCGAAG CTATTGTCAC CAGTTTAAAC ATTGCAGAAG AAATGTCTTC AAATTCACTT
AGCATTCTCT TTGGAGATAC ATTACTGGAG AGTTATCCAA CAGAATGCGA TATTATAGCA
ACAGCTAATA CACTAGATAA CTATACATGG TCCACTTTCT CAACAAAAAA CGAAATTAGC
TGGAAAGAAA ACCAACAAAT TATATGTGGT TATTTTAACT TCACCCATCC AAAAAAACTA
ATAAAATGTA TCACAATTGA GCGCTGGGAC TTTATTAATG GAGTAAATCG TTACAATAAT
GAAAATGGAT TATCAAATTT TAAAGTTAAA AAGTGGTATG ATTTTGGTCA TATAAACACA
TATTACCACT CAAAAACAGC ATTTACGACA CAAAGAGCTT TCAATGATCT GAAAATAAAC
CAAACACAGA TTACAAAATC TAGCAAAAAT AATAATAAAA TTCTTGCCGA AGCAAACTGG
TTTGAATCAA TACCACCAAT GCTCAGAGTT TATACCCCAC AATATTTGGG TTGCACTGAA
GATAAACTAG GAAATTATAG CTACTCTTTA GAATATCTTC ACAACATTTC CTTGAATGAA
TTATTTGTTT TCACTGAGAT TCCAACTAGC ATTTGGGATA ACATTTTCAC TCATTGCATA
AAATTCATTG ACTATTGTAA AGAAGTAAAA AATGTTAAAA ATGTTAAATT TTTCAATGAA
TTACTAACCG TAAAAACAAA AGATAGATTA AATGATTATC TCTTGAGTGA AAAAATAAAA
ATTGACGAAA AGTGGACATT TAACAAAAAC ATCAAGTGTA GCATTTTAGA TATTTTAGAT
CTAAGCAAAC AATATCTTCC AGCAGAAAGT AAGCACGCAA CATTAATGCA TGGAGATTTT
TGCTTTAGCA ATATTTTGTA TGATTTCAGA GCTGACAAGA TAAAAGTCAT AGACCCAAGA
GGAATTACAC ATCAAGGACA AATCAGCATT TATGGTGATA TTTTATATGA TATAGCTAAG
CTAAGTCACT CCGTATTAGG AATGTATGAT TGGATTATTG CTGGTTACCA TCAAACAAGT
GTTGACTACG CTAAAAGAGA ATTATCAATA ACCTTACCAA ACGATAACAA AATCGACAAA
ATAAAGTCGT CGTTTTTAAA TAAGGTTTGC AAACATTACA ATCTAACACC GTTAAATATA
TATGCCATGC AAATTCAACT TTTCATATCC ATGCTAACAT TACACTCTGA TGATAAATAT
AGGCAATCAG GGCTATTTGC TAATGCTTTC AGAATTTACA GTATTATGAA GGAGCTTATA
AAATGA
 
Protein sequence
MFLIMSGAYV TEDLKAEFGT IPPAFLPLGN RRLFQHQIQK IPKGKSIYLS LPDSYKIPEV 
DNSWLAAHNI NIIRTPVNLS IGEAIVTSLN IAEEMSSNSL SILFGDTLLE SYPTECDIIA
TANTLDNYTW STFSTKNEIS WKENQQIICG YFNFTHPKKL IKCITIERWD FINGVNRYNN
ENGLSNFKVK KWYDFGHINT YYHSKTAFTT QRAFNDLKIN QTQITKSSKN NNKILAEANW
FESIPPMLRV YTPQYLGCTE DKLGNYSYSL EYLHNISLNE LFVFTEIPTS IWDNIFTHCI
KFIDYCKEVK NVKNVKFFNE LLTVKTKDRL NDYLLSEKIK IDEKWTFNKN IKCSILDILD
LSKQYLPAES KHATLMHGDF CFSNILYDFR ADKIKVIDPR GITHQGQISI YGDILYDIAK
LSHSVLGMYD WIIAGYHQTS VDYAKRELSI TLPNDNKIDK IKSSFLNKVC KHYNLTPLNI
YAMQIQLFIS MLTLHSDDKY RQSGLFANAF RIYSIMKELI K