Gene Shewmr4_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3840 
Symbol 
ID4254403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4585733 
End bp4586380 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content46% 
IMG OID638120485 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_735960 
Protein GI113972167 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTTT TTTATCATCC GTTATCACGT TATTCACAGA AGGTGTTAAT TGCACTCTAT 
GAAAAACAAG CTAACTTTTA CCCGCGGATC ACCGATTTGC GTGACCCGCT AACACGTCAG
ACATTTCAGC AATTCTATCC ACCTGGCAAA CTCCCGTTAC TCAAAACCCA TGAAGATCAA
CTGCTCCCCG AATCCAGCAT TATTGTTGAA TACCTAGACA AGCATTTTCA AAACGGCACC
GAGTTACTGC CCGCCGAACC CGAGCGCAAT CTCGAGGTGC GCTTATTCGA TCGCATCATA
GATAACGATA TCAATAACCC ATTATTTCAA TTAGAAAAAC TAAAGCATGC CCCCGAAGGC
CATGAATTTG AAATCAAGCA GATAGAAAAG CAGATGTTTG CCCAGTTTCA GCGCTTGGAT
ACCCAACTTA GCCAGAATCA CTGGGTGTGC GGCGACAGTT TTACCTTGGC CGACTGCGCC
CTTATCCCCT GTTTAAGCTA CAGCTTTGCC CACTTAAACC TATTGGATTT AGATGAATTA
GTGCGTTATT GGCAACAGGC GCAGCTTCGC GGCGCCTGGA TGCTGGTTCT TGAAGAGGTG
CTACTCGCCG AAATGGAGGA AGATACAGGA ATTAGGACCA TTCCCTAA
 
Protein sequence
MELFYHPLSR YSQKVLIALY EKQANFYPRI TDLRDPLTRQ TFQQFYPPGK LPLLKTHEDQ 
LLPESSIIVE YLDKHFQNGT ELLPAEPERN LEVRLFDRII DNDINNPLFQ LEKLKHAPEG
HEFEIKQIEK QMFAQFQRLD TQLSQNHWVC GDSFTLADCA LIPCLSYSFA HLNLLDLDEL
VRYWQQAQLR GAWMLVLEEV LLAEMEEDTG IRTIP