| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3827 |
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| Symbol | |
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| ID | 4254390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4570662 |
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| End bp | 4571594 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120472 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_735947 |
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| Protein GI | 113972154 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.101376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAC AAGCTAGATT GACATCGACG CAATGGAAAG CACGCTTCAA AGGGTATGTA
CAGGTAACTA AGCCTGGCAT CATTTTCGGG AATCTGATTT CCGTTGCTGG CGGCTTCCTA
TTGGCCGCTA AGGGCGATGT GGATCTGGTC TTGATGCTGG CAAGCTTAGT GGGATTATCC
TTAGTCGTCG CCTCAGGCTG TGCGATTAAT AACTGTATTG ACCGTGACAT TGACGCCAAA
ATGCAGCGCA CCTGCAAACG CGTCACCGTC ACGGGCGAAA TCCCCCTAAG CCATGTCTTG
CTGTTTGGCA TCGCCTTAGG CGTGCTTGGA TTTGGCATCT TAGCCTTGTT CACCAATACC
TTAGCTCTGC TGTTTGCCGC TATTGGCTAT GTCGTGTATG TCGGGATTTA TAGCCTCTAT
ATGAAGCGAA ACTCGGTTTA CGGCACCTTA GTCGGCAGCT TTTCGGGCGC TGTACCGCCC
GTGGTGGGCT ATTGCAGCGT GACGGGGCAA ATGGATATGG GCGCAGTGAT TTTATTGCTG
ATGTTCAGCC TCTGGCAGAT GCCACACTCC TACGCCATCG CGATTTTCCG CTTTAATGAC
TATGCAGCCG CGAAGATCCC CGTGCTGCCA GTCGCCGAAG GGATGGCCAA GGCGAAGCAC
CATATAGTGC TCTATATCGC AGTGTTCGCC TTGGTCAGCA CCATGCTGCC ACTCGCAGGT
TACACAGGCA CCGCCTTTAT GGCCGTGACC TGTGCCACCA GCCTCTGGTG GCTAACAATG
GCCCTCAAAG GTTATCGTCA AGATGTGGAT ATGCCACGTT GGGCCAGACA AGTGTTTGGT
TTTTCAATTA TTACCATCAC AGCACTCAGT GTAACCATGG CGCTGGATTT TCAAGCGGTC
AGTCAAACCC CACTGTTTAC CTTAGTGCGA TAA
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| Protein sequence | MNTQARLTST QWKARFKGYV QVTKPGIIFG NLISVAGGFL LAAKGDVDLV LMLASLVGLS
LVVASGCAIN NCIDRDIDAK MQRTCKRVTV TGEIPLSHVL LFGIALGVLG FGILALFTNT
LALLFAAIGY VVYVGIYSLY MKRNSVYGTL VGSFSGAVPP VVGYCSVTGQ MDMGAVILLL
MFSLWQMPHS YAIAIFRFND YAAAKIPVLP VAEGMAKAKH HIVLYIAVFA LVSTMLPLAG
YTGTAFMAVT CATSLWWLTM ALKGYRQDVD MPRWARQVFG FSIITITALS VTMALDFQAV
SQTPLFTLVR
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