Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3826 |
Symbol | |
ID | 4254389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4570307 |
End bp | 4570648 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638120471 |
Product | cytochrome C oxidase subunit IV |
Protein accession | YP_735946 |
Protein GI | 113972153 |
COG category | [C] Energy production and conversion |
COG ID | [COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 |
TIGRFAM ID | [TIGR02847] cytochrome o ubiquinol oxidase subunit IV |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0869814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGCAC ATACTCATTC GCATGATCAT AGCCATGGCG CAGACGATCT AGCCGCCAGC ATCAAGTCCT ACTTAGTCGG TTTTGGGCTG TCAGTGGTGT TAACTGCCAT CCCATTCTGG GCGGTAATGA CCCATCACTT CGAGCAATCG ACGACGCTTG CCATCGTCGT TGTCACGGCA CTGGTGCAGA TTTTGGTACA CCTTAAGTAC TTCCTGCACT TGGACTTCTC TAAGGAAGGC AAGGTCAACA CCTTCTCCTT CCTATTTACC GCACTGATCA TAGTGATGGT GGTTGGCTTG TCGGTATGGA TCATTCTCGA AGCTAACGCT TTGATGATGT AA
|
Protein sequence | MGAHTHSHDH SHGADDLAAS IKSYLVGFGL SVVLTAIPFW AVMTHHFEQS TTLAIVVVTA LVQILVHLKY FLHLDFSKEG KVNTFSFLFT ALIIVMVVGL SVWIILEANA LMM
|
| |