Gene Shewmr4_3826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3826 
Symbol 
ID4254389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4570307 
End bp4570648 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content50% 
IMG OID638120471 
Productcytochrome C oxidase subunit IV 
Protein accessionYP_735946 
Protein GI113972153 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0869814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAC ATACTCATTC GCATGATCAT AGCCATGGCG CAGACGATCT AGCCGCCAGC 
ATCAAGTCCT ACTTAGTCGG TTTTGGGCTG TCAGTGGTGT TAACTGCCAT CCCATTCTGG
GCGGTAATGA CCCATCACTT CGAGCAATCG ACGACGCTTG CCATCGTCGT TGTCACGGCA
CTGGTGCAGA TTTTGGTACA CCTTAAGTAC TTCCTGCACT TGGACTTCTC TAAGGAAGGC
AAGGTCAACA CCTTCTCCTT CCTATTTACC GCACTGATCA TAGTGATGGT GGTTGGCTTG
TCGGTATGGA TCATTCTCGA AGCTAACGCT TTGATGATGT AA
 
Protein sequence
MGAHTHSHDH SHGADDLAAS IKSYLVGFGL SVVLTAIPFW AVMTHHFEQS TTLAIVVVTA 
LVQILVHLKY FLHLDFSKEG KVNTFSFLFT ALIIVMVVGL SVWIILEANA LMM