Gene Shewmr4_3755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3755 
Symbol 
ID4254318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4490014 
End bp4490721 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content51% 
IMG OID638120400 
Producthypothetical protein 
Protein accessionYP_735875 
Protein GI113972082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.728885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTAT CCGCAATTTT GACCGAAGCT TATAACTTTT TCCGTAATCA TCTCACTCAG 
CTTGCCATGC TGACAGTGCC ATTGCTGTTA GTGCAGGTGG GGATCCAGCT GTGGCTAGGC
ACAGAGATGA GCAAAGTCGA TCTGGAAAAC CCACAGTTTG GCGCGCCACA TATGATCGCC
ATGATGCTAC TGTTATTGAT TTTTTCGGTG CTGATCGCCG CATTAACGCT ATTTTTAGAG
CTGAGATCCC AGGGACATAA TCCCCCGACG GGAATGGTAT TGAAGGCCAG CTTACCCTTT
GTACCGCCCC TGCTGTTGGC GGGTGTGTTT TCGGGACTGG CGATTTTAGC GCCTGTGATG
CTATTTGCTG CGTTCGGTCC ACTGTGGTTA GTCGGCCTCG TCATCAGTTT CTATCTGTTT
GCGCGACTCG CCTATGTGAA CTTTATGGTG GTGGTTGAAC GTCTCACACC GCTGGAAGCC
ATTAAGGCAA GCTTTAGCTT TAGCGGTCCT ATCGTACTGA AAACCATCGC CTTATTGATG
CTTTATTTGC CGCTTTCTGT CGTGGGTGCG CAGCTCTCTG GCGCGGCTTC TCTGGGCGGC
CTGCCAGTGC AAATGTTGGC GGATACCTTG ATGGCATTTA TCGGTCTATT CGTGAACTTA
GCGCTGTTCC GCCTGTATAT GGTGACGAAA AAGCCTACCG CGGAATAA
 
Protein sequence
MSLSAILTEA YNFFRNHLTQ LAMLTVPLLL VQVGIQLWLG TEMSKVDLEN PQFGAPHMIA 
MMLLLLIFSV LIAALTLFLE LRSQGHNPPT GMVLKASLPF VPPLLLAGVF SGLAILAPVM
LFAAFGPLWL VGLVISFYLF ARLAYVNFMV VVERLTPLEA IKASFSFSGP IVLKTIALLM
LYLPLSVVGA QLSGAASLGG LPVQMLADTL MAFIGLFVNL ALFRLYMVTK KPTAE