| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3727 |
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| Symbol | |
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| ID | 4254290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4454683 |
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| End bp | 4456740 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638120372 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_735847 |
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| Protein GI | 113972054 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.36729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGCA GGGCGTTTAA GAAAAGTGCA ATTGCAGTAA TGGTTTCGAG TTTAGTGATG
TCATCAGCTT ACGCTGCTGT GGACGCAGAA TCTTCTGAAC CGATTGAAAA AATTACTGTT
TATGGTGAGA AAATTGAGCG TAGCCTTAAG GATACGACTT CCTCTATTTC GGTTATCGAT
AAAGACGCGC TCGACAGCGG TCAATATCAA TCCACCTCGA GTGCCTTATC TGAAGTGCCT
AACGTGGTGG TGCTTACGGG ATCTGTGCCG GATATCCGTG GGGTTTCAGG TAATGGTTCA
GCCTCGGGAT TTAACTCTTT TACCGGCGGT GCTCGAGCAC GGGTATCCAC CTTAGTCGAT
GGCGTTGCTG AACCTTTTGT GGCCGATCTT ACTGGTGATA CTGGCCTGTG GGATATCCAA
CAAATTGAGG TGTACCGCGG CCCGCAATCG ACGATTAACG GTCGTAACAG CATTGGTGGC
ACAGTGTTTA TTAAAACGGA AGACCCCACC TTCGATTGGC AAGGTGCGGC TCGTGTTGGT
TATCGCAATC AAGATAACTT TATCGATAGC GCCGTTATGC TCTCTGGCCC CATCCTCGAT
GATGAGCTGG CATTTAGGGT GAGCGGACAA AATGTGACAG GGAATACCTT CAATAAAGGC
TTGGAATATG AGACAAATCC AGTCCCATTT GACCTCAATG AACTGATCAC CAATCGCTGG
CGCGGTAAAT TCCTGTGGCA GCCGAGTGCG ATTGAAGATC TCAAAGTGCT CTACAGCTTT
TCATACAATG ATGAGAAAGG TGACTCTGGG CGCAACTATT TTACCAGTGA TGATCCTTGG
GCGTTTAAGC CTATTTTCCA ACGTTATATC GAGACAAAAT CCACGACTCA CTCAGTGAAA
GTCGATTATG ACCTTGGTGA AGGCCGCGCC TTCGATCTCA TCGTCGCTTA TATGGATTAT
GACTGGGGCT TTGAATCCTA TGAGGCCCTT GCCACGGCGC AGCAATATGT GGATATGAAC
GACCAGAGTT ACACTGTCGA TGGTAAGTAT AGCTTTGGTC TAAAAGATAA AGATTTCAAT
GGCTTTGTGG GTTTAGCCTA TTTTAAACGC GATCAAGATT TTGGTAGTAC TGGCAGCTCT
GTCTACAGTG GGGATGATAG CACTGAGTCC ACCTCTATTT ATGGTGAGAT GACCTATGGC
CTTGCCGAAT CACTCTGGGT CACATTCGGT GGCCGCGTGA TGCGTGAGGA GCAATTGCGT
AACTTCAATA TGCTCTATCA AGGCAGTCAA TTGCAGGAAA AACTCGATAA TGCCAATACC
GTTACCCTGC CGAAGTTAGT GCTGCAATAT GCGCTGAATG ACAGCACAAC TTTGGCGGCC
AGCGTGCGTC GCGGTTATAA CTCGGGCGGC GGTGCGTTGT CGTTAGCCGA AAGTGAGTAT
TACTACTACG ACAAAGAGTA CGTTAATACC TATGAAATCA GCAGTCGCAG CGCGTTTATG
GATGGCGATG TTAACTTTAA TGCCAACCTC TTCTACAACG ATTTCGAAGG TTACCAAGCC
TCTAACAGCG CCCGCAAAAT TACCAATATC GATAAAGCGG TCAGTTATGG TATTGAGGCT
GAATTCAGCG CCATGCTCAC CGAAAATCTG CAGTTTATTT CGGGCGTAGG TTTACTTGAT
AGTGAAATCA AGCAAGCGGA TCCTAGCTAT GGTGACATTA TCGGCAATCA GCTGAACTCG
GCGCCGCATG TGACCGCCAA TGCGGGCTTA AAATATTGGT TGGGCGATGC ATTTTCTTTT
GGTTTTTCAG GTAACTATGT GGGTGAGTAT TATGCGGATA TTAATAATAC CGAATCACGG
GTGGCTGGCG ATTATGTCGT TGCCCGCTTA AGCCTCGATT ATCAAACCGA TAGCTGGAGA
ATCAGCGGCT TTGTAAACAA CCTGTTTGAT GAGCAAGCCT TGACGGTAAA TGAACCTGCC
AGCCGCAGTT ATCCCGATGG TTATGCGGCG ATTATCGACC CAAGAAATCT GGGTGTCTCT
GTGATGTACC GCTTCTAA
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| Protein sequence | MECRAFKKSA IAVMVSSLVM SSAYAAVDAE SSEPIEKITV YGEKIERSLK DTTSSISVID
KDALDSGQYQ STSSALSEVP NVVVLTGSVP DIRGVSGNGS ASGFNSFTGG ARARVSTLVD
GVAEPFVADL TGDTGLWDIQ QIEVYRGPQS TINGRNSIGG TVFIKTEDPT FDWQGAARVG
YRNQDNFIDS AVMLSGPILD DELAFRVSGQ NVTGNTFNKG LEYETNPVPF DLNELITNRW
RGKFLWQPSA IEDLKVLYSF SYNDEKGDSG RNYFTSDDPW AFKPIFQRYI ETKSTTHSVK
VDYDLGEGRA FDLIVAYMDY DWGFESYEAL ATAQQYVDMN DQSYTVDGKY SFGLKDKDFN
GFVGLAYFKR DQDFGSTGSS VYSGDDSTES TSIYGEMTYG LAESLWVTFG GRVMREEQLR
NFNMLYQGSQ LQEKLDNANT VTLPKLVLQY ALNDSTTLAA SVRRGYNSGG GALSLAESEY
YYYDKEYVNT YEISSRSAFM DGDVNFNANL FYNDFEGYQA SNSARKITNI DKAVSYGIEA
EFSAMLTENL QFISGVGLLD SEIKQADPSY GDIIGNQLNS APHVTANAGL KYWLGDAFSF
GFSGNYVGEY YADINNTESR VAGDYVVARL SLDYQTDSWR ISGFVNNLFD EQALTVNEPA
SRSYPDGYAA IIDPRNLGVS VMYRF
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