| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3687 |
|---|
| Symbol | |
|---|
| ID | 4254250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 4404387 |
|---|
| End bp | 4404953 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638120329 |
|---|
| Product | transport-associated |
|---|
| Protein accession | YP_735807 |
|---|
| Protein GI | 113972014 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATATG CTGCCCCACT GTTAATGGTT TGCATGCTGC TGCAAGGTTG CGCCGGTGCC
GTTATGGTGG GCGCAGTCAG TGGCGCCATG ATGGCCAACG ATGAGCGTTC GGTGAAGACT
CAGCTCGATG ATACCAATAC CGATTTTAAG ATCACCAGTG CCCTGCTTGA GCATGAAGAT
CTGAAGAAAC AAACGAATAT CACGGGTGTT TCGGTTAACG GTAATGTGCT GATGATTGGC
CAAGCGCCCA ACTCTATGTT GAGGGATAAG GCGATTAAGG TCGTACAAGA CCTTAAGCTT
GGCGGTAAGA TCCACAATCA GATCCGCATC GGTAACCCGA CCTCTTTCAC TACCCGTAGC
AATGACACTT GGGTGACGAC GAAAGTGAAG GGACGCATGC TCAACGAGAA AGAGCTGGAT
GTCACCCGTA TTAAGGTCAT CACAGAAAAC GGTGAAGTCT TCCTACTCGG ACTCATTCAC
CGCTCTCAGG CCGACATGGC GGTCGATATC GCGCGCAACA CCGCGGGCGT GCGTAAAGTC
GTTAAAGTCT TCGAATACAT CGAATAA
|
|---|
| Protein sequence | MRYAAPLLMV CMLLQGCAGA VMVGAVSGAM MANDERSVKT QLDDTNTDFK ITSALLEHED
LKKQTNITGV SVNGNVLMIG QAPNSMLRDK AIKVVQDLKL GGKIHNQIRI GNPTSFTTRS
NDTWVTTKVK GRMLNEKELD VTRIKVITEN GEVFLLGLIH RSQADMAVDI ARNTAGVRKV
VKVFEYIE
|
|---|
| |