| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3631 |
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| Symbol | |
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| ID | 4254195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4338532 |
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| End bp | 4341123 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638120274 |
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| Product | aconitate hydratase |
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| Protein accession | YP_735752 |
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| Protein GI | 113971959 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCC TCTATCGCAA GCCCTTACCA GGCACAGCAC TCGACTATTT CGATACCCGT
GAAGCCATTG AAGCCATCAG CCCCGGCGCC TACGCTAAAC TGCCCTACAC CTCACGAGTG
TTAGCGGAAA ACTTAGTGCG TCGCTGCGAG CCAGAAGCAC TCACAGACTC GCTAAAACAA
ATTATTGAAT CAAAACAGGA ACTGGATTTT CCATGGTTCC CTGCGCGTGT AGTGTGCCAC
GATATTTTAG GGCAAACCGC GCTGGTAGAC TTAGCGGGTC TGCGTGATGC GATTGCCGCT
AAGGGTGGCG ATCCGGCGCA GGTTAACCCT GTGGTTCCGA CCCAGCTGAT TGTCGACCAT
TCTCTGGCTG TGGAATATGG TGGTTTCGAT AAGGATGCCT TTGCGAAAAA CCGCGCCATC
GAAGATAGAC GCAACGAAGA CAGATTCCAC TTTATCAACT GGACTCAAAA AGCGTTTAAA
AACATCGATG TGATCCCACA AGGTAACGGC ATCATGCACC AGATTAACCT AGAGCGTATG
TCACCCGTGG TCCATGCCCG TGATGGCGTG GCCTTCCCCG ATACCTTAGT GGGTACCGAC
AGCCATACGC CACACGTAGA TGCGCTGGGT GTTATCGCCA TCGGCGTGGG CGGTCTTGAG
GCCGAAAGCG TGATGTTAGG TCGCGCCTCT TATATGCGTC TACCCGACAT TATCGGTGTT
GAGCTCACAG GCAAGCCTCA ACCGGGCATT ACCGCCACCG ATATCGTATT AGCCCTGACC
GAATTCCTGC GTAAGGAAAA AGTGGTTTCT TCTTACCTTG AGTTCTTCGG CGAAGGCGCA
GAGGCTTTAA CACTTGGCGA TCGCGCGACT ATCTCTAACA TGACACCAGA ATTTGGCGCC
ACCGCCGCCA TGTTCTATAT CGACCAACAG ACGCTGGACT ACTTAACCCT GACGGGTCGT
AGCGACGAGC AAGTGAAGCT GGTTGAAACC TATGCCAAGA CCACAGGTTT GTGGAGCGAT
GATCTCAAGC AGGCCGAGTA CCCACGTACC CTGCATTTTG ACCTGTCATC GGTAGTGCGT
ACCATTGCAG GCCCATCGAA TCCCCATGCT CGCGTTCCGA CTTCAGAGTT GGCCGCACGC
GGCATCAGTG GCGTGGTTGA AAACGAGCCA GGCTTAATGC CAGATGGCGC CGTGATTATT
GCGGCCATCA CTAGCTGCAC TAACACCAGT AACCCACGCA ACGTGATTGC GGCGGGCCTG
CTTGCACGTA ACGCCAATGC CAAAGGCTTA AGCCGTAAAC CTTGGGTGAA AACCTCACTC
GCCCCCGGCT CTAAGGCGGT ACAACTGTAT TTAGAAGAAG CCAACCTGCT GCCAGAGCTG
GAGTCATTAG GCTTCGGTAT TGTCGGTTTT GCCTGCACCA CCTGTAACGG TATGAGCGGC
GCACTCGACC CAGTGATTCA GCAGGAAGTG ATCGACCGCG ATCTTTACGC CACCGCCGTA
TTATCCGGTA ACCGTAACTT CGACGGCCGT ATTCACCCTT ACGCTAAGCA AGCTTTCCTC
GCATCACCAC CATTAGTCGT CGCCTATGCA ATCGCGGGCA CCATTCGCTT CGATATCGAG
AAGGATGTGT TAGGCCATGA CCAAAACGGT AACCCAGTTC GCCTTATCGA CATTTGGCCA
ACGGATGCCG AAATCGATGC CGTGATTGCA GCAAGCGTGA AGCCAGAGCA ATTCCGTAAG
GTCTACGAGC CGATGTTCGA CCTGAGCGTC GACTATGGCG ATAAGGTCAG CCCACTGTAC
GACTGGCGTC CACAATCGAC CTATATCCGC CGCCCTCCTT ACTGGGAAGG CGCATTAGCG
GGCGAGTGCA CCCTCAAGGG CATGCGCCCA TTGGCCGTGT TGGGTGACAA CATCACCACA
GACCATTTAT CACCCTCGAA CGCTATTATG ATGGACAGCG CGGCGGGCGA ATACCTGCAC
AAGATGGGTC TGCCAGAGGA AGACTTTAAC TCCTACGCGA CCCACAGGGG CGACCATCTA
ACGGCCCAGC GTGCCACCTT CGCCAACCCC AAACTCAAAA ACGAGATGGC GGTTGTCGAT
GGCAAGGTGA AGCAAGGCTC ACTGGCGCGT ATCGAGCCAG AAGGCCAAGT GACCCGCATG
TGGGAAGCCA TTGAAACCTA TATGGATCGC AAACAGCCGC TGATTATTAT CGCCGGCGCC
GACTACGGTC AGGGTTCATC CCGTGACTGG GCGGCAAAAG GCGTGCGCTT AGCGGGCGTT
GAGGCCATTG TCGCCGAAGG CTTCGAGCGT ATTCACCGCA CTAACTTAGT CGGCATGGGC
GTGTTACCGC TGGAGTTTAA GGCAGGCGAG AATCGCGCTA CCTATGGCAT AGATGGTACC
GAAGTGTTTG ACGTTTATGG TGAAATCGCG CCAAGAGCGG ATCTCACTGT CGTGATTAGC
CGTAAAAACG GCGAGCGCGT CGAAGTACCA GTGACCTGTC GCCTCGATAC CGCAGAAGAA
GTATCTATCT ATTCTGCCGG CGGCGTATTG CAGCGTTTTG CGCAGGACTT TTTAGAGTCG
AATCTGAAGT AA
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| Protein sequence | MNRLYRKPLP GTALDYFDTR EAIEAISPGA YAKLPYTSRV LAENLVRRCE PEALTDSLKQ
IIESKQELDF PWFPARVVCH DILGQTALVD LAGLRDAIAA KGGDPAQVNP VVPTQLIVDH
SLAVEYGGFD KDAFAKNRAI EDRRNEDRFH FINWTQKAFK NIDVIPQGNG IMHQINLERM
SPVVHARDGV AFPDTLVGTD SHTPHVDALG VIAIGVGGLE AESVMLGRAS YMRLPDIIGV
ELTGKPQPGI TATDIVLALT EFLRKEKVVS SYLEFFGEGA EALTLGDRAT ISNMTPEFGA
TAAMFYIDQQ TLDYLTLTGR SDEQVKLVET YAKTTGLWSD DLKQAEYPRT LHFDLSSVVR
TIAGPSNPHA RVPTSELAAR GISGVVENEP GLMPDGAVII AAITSCTNTS NPRNVIAAGL
LARNANAKGL SRKPWVKTSL APGSKAVQLY LEEANLLPEL ESLGFGIVGF ACTTCNGMSG
ALDPVIQQEV IDRDLYATAV LSGNRNFDGR IHPYAKQAFL ASPPLVVAYA IAGTIRFDIE
KDVLGHDQNG NPVRLIDIWP TDAEIDAVIA ASVKPEQFRK VYEPMFDLSV DYGDKVSPLY
DWRPQSTYIR RPPYWEGALA GECTLKGMRP LAVLGDNITT DHLSPSNAIM MDSAAGEYLH
KMGLPEEDFN SYATHRGDHL TAQRATFANP KLKNEMAVVD GKVKQGSLAR IEPEGQVTRM
WEAIETYMDR KQPLIIIAGA DYGQGSSRDW AAKGVRLAGV EAIVAEGFER IHRTNLVGMG
VLPLEFKAGE NRATYGIDGT EVFDVYGEIA PRADLTVVIS RKNGERVEVP VTCRLDTAEE
VSIYSAGGVL QRFAQDFLES NLK
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