| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3593 |
|---|
| Symbol | |
|---|
| ID | 4254157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 4300542 |
|---|
| End bp | 4301060 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638120236 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_735714 |
|---|
| Protein GI | 113971921 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.272187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACTC AGTTTTTCTC CCTCGCGCCT CTGACTCAAA CTTCAATTTT AAGCTTTATT
ATCTTGTTGT TAGGTTTAGC TGGTGTACTG TGGATGTTGT GGGTTAAACC TATGCCGAAA
GTGGCTAAAT CGGCGAGCTT AGGCATCTTG TTAGTGATGA TTGGCGGATT TTCTTGGGTG
TTTTATCAAT CCCATAATGC TGAAATCGCG CTAACCGACA CCGAGCTAAA ACTCGATATT
CCCTTCTATA AAGTGCAATT AGCGCGTTCC GAACTGTTGG TCGAGCAGGC GCGTCTTATC
GACTTGAAGC AAGAGATGGA TTTAGCGCCC AGCTTTAAAA CCAATGGTAT AGGTATGCCA
GGGTTTCAAC TCGGTTGGTT TAATCTGAAG GGGAAGGGTA AGGCATTTGT GGCCGTGACG
GATAAATCCG AACTAGTGTT AGTGCCAACG ACGCGAGGCT ACAATCTGCT CTTGTCTGTG
CCAGAGGGTG AGAAGTTTAT TAGCCAGCTA CAAAAATAG
|
|---|
| Protein sequence | MVTQFFSLAP LTQTSILSFI ILLLGLAGVL WMLWVKPMPK VAKSASLGIL LVMIGGFSWV
FYQSHNAEIA LTDTELKLDI PFYKVQLARS ELLVEQARLI DLKQEMDLAP SFKTNGIGMP
GFQLGWFNLK GKGKAFVAVT DKSELVLVPT TRGYNLLLSV PEGEKFISQL QK
|
|---|
| |