| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3592 |
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| Symbol | |
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| ID | 4254156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4299595 |
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| End bp | 4300479 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120235 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_735713 |
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| Protein GI | 113971920 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.228436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATA ACGAATACCG CAAAGGGATC CTACTTGCCG TCAGTGCTTA CTGTATGTGG
GGATTTGCGC CCTTATATTT CAAACTACTC CACCATGTTT CGGCCACCGA AATTTTACTG
CATCGGGTGA TCTGGTCATT TGTGTTTATG GTGATCATCA TGCTGTTTAT CGGTGGCTTT
GGAAAACTGC GCCAGCTGTT TAAACAGCCC AAACAACTAC TCGTACTCAC CATCACCTCC
CTATTAATTG CGGCCAACTG GTTGATTTTT ATCTGGGCTG TGAATAACGA TCATATGCTC
GATGCCAGCT TGGGTTACTT TATTAATCCC CTACTGAATG TGCTGCTCGG CATGCTGTTT
TTAGGTGAAA GATTACGTAA GTTGCAATGG TTTGCCGTCT CGCTGGCGAG TGCTGGCGTG
CTGATCCAAT TAGTCTCATT CGGCTCGATC CCTATTGTCT CCCTCGCCTT AGCGGGCACC
TTCGGGGTGT ATGCGCTGCT GCGTAAAAAG GTCAATGTGG ATGCAAAATC GGGTCTGCTA
GTCGAAACCG CTATCCTGCT GCCAGTCGCA TTGGTTTATC TGGTCGCGAC CTTAGATAGC
GCCACAGCGA ATATGCTAAC CAACGATTGG CACCTTAACG TATTATTAAT GGCAGCCGGG
ATTGTTACCA CGATTCCACT ATTGTGTTTT GCCGGTGCAG CGGTACGTAT TCCATTGTCT
ATGCTCGGCT TTTTCCAATA TATCGGCCCG AGTATTATGT TTATCCTCGC GGTAACCTTA
TTCAATGAAC CCTTCGATGC CGAGAAGAGC ATCACCTTCG GCTTTATCTG GAGCGCCCTG
TTGGTGTTCA CCTTCGATAT GGCCTATAAA CGCAAAACGG CGTGA
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| Protein sequence | MPDNEYRKGI LLAVSAYCMW GFAPLYFKLL HHVSATEILL HRVIWSFVFM VIIMLFIGGF
GKLRQLFKQP KQLLVLTITS LLIAANWLIF IWAVNNDHML DASLGYFINP LLNVLLGMLF
LGERLRKLQW FAVSLASAGV LIQLVSFGSI PIVSLALAGT FGVYALLRKK VNVDAKSGLL
VETAILLPVA LVYLVATLDS ATANMLTNDW HLNVLLMAAG IVTTIPLLCF AGAAVRIPLS
MLGFFQYIGP SIMFILAVTL FNEPFDAEKS ITFGFIWSAL LVFTFDMAYK RKTA
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