| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3580 |
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| Symbol | |
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| ID | 4254144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4283971 |
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| End bp | 4284675 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120223 |
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| Product | PepSY-associated TM helix |
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| Protein accession | YP_735701 |
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| Protein GI | 113971908 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.590786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTA CTCAAATCCG AACCTGCCAC AAGTGGTTTG CGCTGCTTAC CGCGATTCAA
TTGCTACTTT GGTTAGCCAC CGGCGCTTAT ATGGTGTGGA TGGATATCGA ATTTATTCGC
GGCAAGCCAC TGGTAAACAA AGCAAACACG GCTACATACC AAGTGGAGAC GCCCGCGTAC
AGCTTTACGG ACTTTATCAA AGCACATCCC GATGCGACGG ATATTAGTTT GTACGCGAAT
CAAGGCACAC TCTACTATCG CGCCAACATC GCGGGAAAAT TGCAGCGCTT TAGCAGTGAG
ACGGGGGAAG TATTACCGTT GCTCGATAAA CAACAGGCGC TCGACGCTGC ACAACGAGTC
TATACGGGTC AGGCTAAATT TATCGGCTCG ACACTCATCG AGCAGAACGC TCCGAGTGAA
ATCCCTGCTC GCGCACTCCC CGTTTGGCAA CTGACGTTAG ACGATGCCAT GCATTCGACG
CTTTATGTTT CAGCAATAAC CGGACAGCTC GTAACAGCCC GCCATGATTA TTGGCGGCTC
TTCGATGTAA TGTGGATGCT GCACATAATG GACTACGAGA CCCGTGTGAA TGTAAACAAT
TCTTTACTCA CACTCATGAG CAGTCTAGCC TTGTTGACGA CACTCTTTGG TATGGCTTTG
ACTTATATCA GTTTTAGAGC CAAACATCGT GAGGAGCGAG TATGA
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| Protein sequence | MKATQIRTCH KWFALLTAIQ LLLWLATGAY MVWMDIEFIR GKPLVNKANT ATYQVETPAY
SFTDFIKAHP DATDISLYAN QGTLYYRANI AGKLQRFSSE TGEVLPLLDK QQALDAAQRV
YTGQAKFIGS TLIEQNAPSE IPARALPVWQ LTLDDAMHST LYVSAITGQL VTARHDYWRL
FDVMWMLHIM DYETRVNVNN SLLTLMSSLA LLTTLFGMAL TYISFRAKHR EERV
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