Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3542 |
Symbol | |
ID | 4254107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4232745 |
End bp | 4233665 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638120179 |
Product | putative manganese-dependent inorganic pyrophosphatase |
Protein accession | YP_735664 |
Protein GI | 113971871 |
COG category | [C] Energy production and conversion |
COG ID | [COG1227] Inorganic pyrophosphatase/exopolyphosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTATGT ACGTTGTCGG TCACAAAATC CCCGATTCTG ATTCAATCTG CGGTGCTATC GCGTTAGCTT ATTTAAAAAA CCAAATCGGT GAAGAAGCCG TTGCCGCACG TTTAGGTGAG TTATCACCCG AAACCGCTTT TATTCTGGAG CGTTTTGGCT TTGAAGCGCC AGAATACAAA ACCAGCTATG CTGGCGAGCA GGTCTACATT GTTGACCACT CAGAACTGAC TCAAGCACCG GACGATATCG CTCAAGCGAC TATCGTAGGT ATTGTGGATC ACCACAAATT AGGCGATCTG ACCACTGATA CGCCTTTAGA GTGCTGGATC CGCCCTGTTG GTTGCAGCAA CACAGTCATT AAGATGATGT ACGACTTCCA CCAAGTTGCC ATCCCTAAAA ATATCGCTGG CATCATGATG TGCGCCATCC TGAGCGACAC TGTGATCTTC AAATCACCTA CCTGCACTAC AGCCGACATT CGCTGCGTTG AGGCCTTAGC CGAAATCGCT GGCGTTGAAG ACTTTAAAGC GCTGGGCATG GAAATGTTCA AGGTAAAATC GGCAGTTGAA GGCACGCCAG CACGCGATCT CGTGATGCGC GACTTTAAAG ACTTCAACAT GAACGGTAAC TTAGTGGGTA TCGGCCAGTT AGAAGTGATT GATCTGTCTG TATTTGATTC AATCAAAGCC GAACTGGAAG CCGATATCAA AGCACTGAAA GTTGAAGGCA ACCGTCACAG CGTACTGTTG CTGCTGACTG ACATTATGAA AGAAGGCTCA GAGCTGTTAG TGGTTTCTGA CGATGCCGAT CTGGTTAACC GTGCCTACGG TAAAACCCCA GTCGATGGCA AAGTGTGGTT AGACGGTGTA TTAAGCCGTA AGAAGCAAGT TGTGCCACAA CTGCAGGCCG CTTTCGCTTA A
|
Protein sequence | MPMYVVGHKI PDSDSICGAI ALAYLKNQIG EEAVAARLGE LSPETAFILE RFGFEAPEYK TSYAGEQVYI VDHSELTQAP DDIAQATIVG IVDHHKLGDL TTDTPLECWI RPVGCSNTVI KMMYDFHQVA IPKNIAGIMM CAILSDTVIF KSPTCTTADI RCVEALAEIA GVEDFKALGM EMFKVKSAVE GTPARDLVMR DFKDFNMNGN LVGIGQLEVI DLSVFDSIKA ELEADIKALK VEGNRHSVLL LLTDIMKEGS ELLVVSDDAD LVNRAYGKTP VDGKVWLDGV LSRKKQVVPQ LQAAFA
|
| |