Gene Shewmr4_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3542 
Symbol 
ID4254107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4232745 
End bp4233665 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content48% 
IMG OID638120179 
Productputative manganese-dependent inorganic pyrophosphatase 
Protein accessionYP_735664 
Protein GI113971871 
COG category[C] Energy production and conversion 
COG ID[COG1227] Inorganic pyrophosphatase/exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATGT ACGTTGTCGG TCACAAAATC CCCGATTCTG ATTCAATCTG CGGTGCTATC 
GCGTTAGCTT ATTTAAAAAA CCAAATCGGT GAAGAAGCCG TTGCCGCACG TTTAGGTGAG
TTATCACCCG AAACCGCTTT TATTCTGGAG CGTTTTGGCT TTGAAGCGCC AGAATACAAA
ACCAGCTATG CTGGCGAGCA GGTCTACATT GTTGACCACT CAGAACTGAC TCAAGCACCG
GACGATATCG CTCAAGCGAC TATCGTAGGT ATTGTGGATC ACCACAAATT AGGCGATCTG
ACCACTGATA CGCCTTTAGA GTGCTGGATC CGCCCTGTTG GTTGCAGCAA CACAGTCATT
AAGATGATGT ACGACTTCCA CCAAGTTGCC ATCCCTAAAA ATATCGCTGG CATCATGATG
TGCGCCATCC TGAGCGACAC TGTGATCTTC AAATCACCTA CCTGCACTAC AGCCGACATT
CGCTGCGTTG AGGCCTTAGC CGAAATCGCT GGCGTTGAAG ACTTTAAAGC GCTGGGCATG
GAAATGTTCA AGGTAAAATC GGCAGTTGAA GGCACGCCAG CACGCGATCT CGTGATGCGC
GACTTTAAAG ACTTCAACAT GAACGGTAAC TTAGTGGGTA TCGGCCAGTT AGAAGTGATT
GATCTGTCTG TATTTGATTC AATCAAAGCC GAACTGGAAG CCGATATCAA AGCACTGAAA
GTTGAAGGCA ACCGTCACAG CGTACTGTTG CTGCTGACTG ACATTATGAA AGAAGGCTCA
GAGCTGTTAG TGGTTTCTGA CGATGCCGAT CTGGTTAACC GTGCCTACGG TAAAACCCCA
GTCGATGGCA AAGTGTGGTT AGACGGTGTA TTAAGCCGTA AGAAGCAAGT TGTGCCACAA
CTGCAGGCCG CTTTCGCTTA A
 
Protein sequence
MPMYVVGHKI PDSDSICGAI ALAYLKNQIG EEAVAARLGE LSPETAFILE RFGFEAPEYK 
TSYAGEQVYI VDHSELTQAP DDIAQATIVG IVDHHKLGDL TTDTPLECWI RPVGCSNTVI
KMMYDFHQVA IPKNIAGIMM CAILSDTVIF KSPTCTTADI RCVEALAEIA GVEDFKALGM
EMFKVKSAVE GTPARDLVMR DFKDFNMNGN LVGIGQLEVI DLSVFDSIKA ELEADIKALK
VEGNRHSVLL LLTDIMKEGS ELLVVSDDAD LVNRAYGKTP VDGKVWLDGV LSRKKQVVPQ
LQAAFA