| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3509 |
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| Symbol | |
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| ID | 4254075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4194678 |
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| End bp | 4195514 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638120147 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_735632 |
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| Protein GI | 113971839 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.126996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAACAC CGGGACTCGA TCAAGAATTG CAGCAACTCC AAGGCGTTTA CCAGCTGATC
ACCGAGTTTT TAGTCAATTA TAGTTTCCAA TTAATCGGTG CGGCGCTGGT CTTTTTATTG
GGTCTGTGGG TCGCCAGCAA AGTCTCGCGC TTAGTCGCCA AGCAGTGCGA AAAGCATCAC
ATCGACATCA CCCTGAGTAA CTTTGTCAGC AATCTGATCC GTATCCTAAT CATTGTCATG
GTGGGTATTA TTGCCCTAGG CAAGATAGGC ATTAGCGTCA CGCCCATGGT GGCAGCGATT
GGTGCCGCCT CCCTCGGCGC GGGTTTAGCC CTACAGGGCA TGCTGTCGAA CTATGCTGCT
GGGGTCACCA TTATTGTGAC TCGCCCTTTT GTGGTCGGAA ATACCATCGA AATCAAAGGT
GAAAGCGGTG TCGTCACGCG GATTAATTTG GGAATGACGA TTTTAACCAA TGAGGAAGGC
GAGCAAATTA GCATTCCCAA CAAGCACATC GTTGGTGAGA TCTTGCATAA CTCCTTCGGT
AATAAGCTGG TCGAAACCCA ATTTAATCTG AGTTATAACA ACGACCCTGA AGCGGCGATA
AGCCTAATCA CAGAGCTGCT GAGCCAAAAC CCCAATGTCA GTCAGGACAC TACACCAAAT
ATTGGTATCA ATGGTTTTAA TGCCATCGGC ATCGAGATTG GTGTGCGTTA CTGGGTACCG
ACACAAAGTT ACTTTCAGCA TAAATACAAG ATAAATATGG CCATTTATAA CGCCCTCAAA
CAGGCTGGTA TCGAAATGGC TTGCCCAGTG CGAGAAATTC ATTTGCAAGA AAAGTAA
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| Protein sequence | MITPGLDQEL QQLQGVYQLI TEFLVNYSFQ LIGAALVFLL GLWVASKVSR LVAKQCEKHH
IDITLSNFVS NLIRILIIVM VGIIALGKIG ISVTPMVAAI GAASLGAGLA LQGMLSNYAA
GVTIIVTRPF VVGNTIEIKG ESGVVTRINL GMTILTNEEG EQISIPNKHI VGEILHNSFG
NKLVETQFNL SYNNDPEAAI SLITELLSQN PNVSQDTTPN IGINGFNAIG IEIGVRYWVP
TQSYFQHKYK INMAIYNALK QAGIEMACPV REIHLQEK
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