| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3490 |
|---|
| Symbol | |
|---|
| ID | 4254056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 4173125 |
|---|
| End bp | 4174003 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638120128 |
|---|
| Product | biogenesis protein MshI |
|---|
| Protein accession | YP_735613 |
|---|
| Protein GI | 113971820 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAG GACTTTTTGC TCGGTTGGCC TTTTGGCGAG CTAAACAGGC TGACGCGGCG
CTCGGTGTAT ATGTGTGTGC CGATAAGCTG TGGGTCTACG CCCCCGCGAC TGAAAGTCTT
GCAGAACAAT GGGTTTCCTA TGAACTGCAG CAGAACCAAT GGCAACAAGC CTTTGCCGAA
CTTGCCAATG CTTTTCCCCA TGCCGCATTG CAAATTGTCC TTAGCAGTGG CCGTTACCAA
TTGCTAGTAG CCGATAAACC TAATGTCGAT AGTGACGAAT TATCCCAAGC TTTACTCTGG
TCTATCAAAG ACATGGTCAC TATCCCTGTG CCGCAAATTC ACTTGGATTA CTTTGAATCG
CCACTGCCGA GCAATAAGCT TAATGTGGCC GTGGTCGATA AAGACAAATT ACGCGCCATG
GTGCAGGCCA TCAGCGATCA AGGTTTAAGC GTGCTAGGAA TTAGCATCGA AGAATTAGCC
ATGACTAACC TGTTTGATGA GGATAATCAG GCGAGATTAG TCGTGAGCCA TCATACAGGC
CAAGAGTTGT TGTTGACTGT GGTCAAGCAA GGTCAGCTCT ATATGCAGCG CCGAGTGCGC
GGTTTTACCG AGCTGGATAA GGCCGAAGTG GATGAACTTA ATTACGGGCT AGCGGATAAC
TTAAGCCTCG AAATTCAGCG TTCTATGGAC TACTTTGAGA GTCAATTGCG CCAGCCTCCT
GTCGCGTCAA TTGAATTATT TGCCGATGGC GCCGTGGATG CCTTGGCTAA GTTGGTATCG
GCTAACTTTA ACCAAGCCGT TAATGTCGTT AATAAGCGTG CCGTGGGTGC GAGCATGGCG
GGATTAGCCT TTAGTGAACT TTCACGAGGT GCCGAGTGA
|
|---|
| Protein sequence | MDKGLFARLA FWRAKQADAA LGVYVCADKL WVYAPATESL AEQWVSYELQ QNQWQQAFAE
LANAFPHAAL QIVLSSGRYQ LLVADKPNVD SDELSQALLW SIKDMVTIPV PQIHLDYFES
PLPSNKLNVA VVDKDKLRAM VQAISDQGLS VLGISIEELA MTNLFDEDNQ ARLVVSHHTG
QELLLTVVKQ GQLYMQRRVR GFTELDKAEV DELNYGLADN LSLEIQRSMD YFESQLRQPP
VASIELFADG AVDALAKLVS ANFNQAVNVV NKRAVGASMA GLAFSELSRG AE
|
|---|
| |