Gene Shewmr4_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3459 
Symbol 
ID4254025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4137958 
End bp4138497 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content42% 
IMG OID638120097 
Producthypothetical protein 
Protein accessionYP_735582 
Protein GI113971789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA ATAAAATTAT GATGATGGCA GCAGGTGCAG CGTTACTGAC TAGCAGTGTT 
CAAGCCGTCG AGATCGATTA CTTTGCAGGT ATGGGTTTAG GTTATCAAGC AGATGAGATT
GAAGGTGTTA TCAACAAAGA CACCGAAGAC CTAAGCTATC AAGCCCGCAT TGGTATGTTG
ATTGAGCAAA ACCACCGTAT CACTGGTACG TTTGGTTATA TGGAAGACAA ATTCAACTTT
GCCAATGAAA AGTTTAAGCA GGAACAGTAC AGCTGGTTAG TGTCCTATGA CTACCTGTTA
CCAGTACATA AAGACGTTAA CCTGTTTGCC GGGGTTAGTA TTGGTGCCAA CGACAACAAA
GTCTCAGGCA AATCGGCAAC CGATTTTGTA TATGGCGGTC AAGTTGGTAT GCAGTACAAA
TGGAGCGAGC ATTTCTCATC GGATCTTGGC TACCGTTATT TAGCCCAAGA CTATGAAGAA
AACGGCAATG AAATCAACAA CAGTCAACAG GTTTACCTCA CCCTAGACTA CAAGTTCTAA
 
Protein sequence
MKLNKIMMMA AGAALLTSSV QAVEIDYFAG MGLGYQADEI EGVINKDTED LSYQARIGML 
IEQNHRITGT FGYMEDKFNF ANEKFKQEQY SWLVSYDYLL PVHKDVNLFA GVSIGANDNK
VSGKSATDFV YGGQVGMQYK WSEHFSSDLG YRYLAQDYEE NGNEINNSQQ VYLTLDYKF