| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3439 |
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| Symbol | |
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| ID | 4254005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4111873 |
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| End bp | 4113054 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638120077 |
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| Product | cystathionine gamma-synthase |
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| Protein accession | YP_735562 |
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| Protein GI | 113971769 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAG GCAAATTAGT GACCGAACGT CAATTAGCCA CATTAGCAGT GCGTCAGGGT
ATCGAAAGCG ATACTCAGCA TGGCGCGGTG GTGCCGCCAA TTTACCTGTC GACTAATTAC
GCCTTCGATG GTCATAAAAA TCCTCGCGAA TTTGATTACA GTCGTTCCGG CAATCCTACC
CGCAGCATCT TAGGTGATGC CTTAGCTAAG CTGGAAAAGG GCGCAACTGG CGTGGTGACT
TGCACTGGCA TGGCAGCCAT TACCTTAGTC ACTACCTTGC TCGGCCCAGA TGACTTGCTG
GTGGTTCCAC ACGATTGTTA CGGCGGTTCG TACCGTTTAT TCACCAACCT CGCGAAAAAA
GGCCAATTTA AACTGCTGGT GGTCGATCAA ACCGATGCTC AAGCGCTTGA GCAAGCCATC
GCCCAGCAAC CTAAGATGGT ATGGATTGAA ACCCCCTCTA ACCCTCTGCT GCGAGTCGTC
GATATCGAAG CTATCGCCAA GGCGAGCCAC GCAGTGGGCG CTTTAGTGGT AGTGGACAAC
ACTTTCCTCT CGCCCATTTT GCAGCAACCG CTGTTACTCG GTGCCGATAT CGTTATCCAC
TCCACCACTA AGTACATCAA TGGTCACAGC GATGTGGTGG GCGGCGCGGT GATCGCCAAA
GATCCTCAAC TCGGTGAGAC CTTACATTGG TGGTCGAACA CTTTAGGTTT AACTGGGTCT
GCCTTCGACA GTTATCAAAC CCTGCGGGGT CTGCGTACCT TAGCCGTGCG CATTCGCGAG
CACCAAAGCA ATGCCCAGCG TATTCTGGAC GTGCTGACGA GCAGCCCTGT GGTGAGCAAA
GTGTATTACC CAGGACTTGC GGATCACCCC GGCCATGCCA TTGCCGCCAA GCAGCAAAAA
GGCTTTGGCG CTATGCTGAG TTTTGAGCTT AAGGGCGGCG AGGCCGAAGT GGTCGCCTTT
TTAGATGCCT TAAGTTTATT CAGCGTGGCC GAGAGCTTAG GTGGCGTTGA GAGTCTCGTG
GCCGTGCCCG CGACTATGAC CCATAGGGCG ATGGAGCCCC AAGCGCGTTA TGAAGCTGGC
ATTAAAGACA CCCTATTACG TTTGTCGGTT GGTATTGAAG ATGCCGACGA CTTAGTTGCA
GATATTCAAG CAGGATTGGC CGCCGTTGCG GCTTGTCAGT AG
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| Protein sequence | MTAGKLVTER QLATLAVRQG IESDTQHGAV VPPIYLSTNY AFDGHKNPRE FDYSRSGNPT
RSILGDALAK LEKGATGVVT CTGMAAITLV TTLLGPDDLL VVPHDCYGGS YRLFTNLAKK
GQFKLLVVDQ TDAQALEQAI AQQPKMVWIE TPSNPLLRVV DIEAIAKASH AVGALVVVDN
TFLSPILQQP LLLGADIVIH STTKYINGHS DVVGGAVIAK DPQLGETLHW WSNTLGLTGS
AFDSYQTLRG LRTLAVRIRE HQSNAQRILD VLTSSPVVSK VYYPGLADHP GHAIAAKQQK
GFGAMLSFEL KGGEAEVVAF LDALSLFSVA ESLGGVESLV AVPATMTHRA MEPQARYEAG
IKDTLLRLSV GIEDADDLVA DIQAGLAAVA ACQ
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