| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3299 |
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| Symbol | |
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| ID | 4253866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3937616 |
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| End bp | 3939886 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638119938 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_735423 |
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| Protein GI | 113971630 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTAA ACAGTCTTGG TTTTCCCCGT ATCGGGCGTC GTCGTGAACT GAAATTTGCC
CTCGAAAAAT ACTGGCGTGG TGAGAGCACT CAAGCCGAGC TGCATGAGGT GGCCAAGGAG
TTACGTCGTA CCCATTGGCA ATGGCAAGTC GCCGCTGGGA TCGAGCAAGT GCCAGTGGGT
GATTTTGCCT TTTACGATCA AGTGTTAACC CTGAGTGCGA CCCTAAACGC CATTCCAGAT
CGTCACCGTG GCGAGGGCGC TATCGATCTT GATACCTTAT TCCGCGTTGC CCGTGGCCGT
GCGCCAACTG GCACCGATGC GCCAGCCTCG GAAATGACTA AGTATTTCAA CACTAACTAT
CACTACTTAG TGCCAGAACT TAAGCAAGAC CAAGTGTTCT CTATCGCCTA TGAGCAGTTT
TTTGATGAAG TCGCCGAGGC GCAGGCGCTG GGTTATCAAG CCAAGCCCGT GCTGTTAGGC
CCTGTGAGTT ACTTGTATCT GGCAAAAACC GTGGGTCAGG ATTTCGATAA ACTCAGCCTA
TTGCCCAATC TGTTAAAGGC CTATGCCGAC ATACTTGCGC GTTTTGCCGC GCAGGGCGTG
ACTTGGGTAC AGCTTGAGGA GCCGGTTCTG GCTCTCGAAT TAGCCGCCGA TTGGCAAGCT
GCGATTAGCG AAGCTTATCA AGCGCTTAAA ACGGCTCAAG TGAAGATTTT ACTCACCAGC
TACTATGGCA GCATCAGTCA TCATCAGGCG CTGGTTTCCG CGCTGCCGGT GGCGGGTCTG
CACCTCGATT TAGTAACAGC CCCTGAACAA TTGGCCTTGT TTGCCAATGC CTTAAGACCA
GATCAAATTC TGTCGGCGGG TGTAGTTAAT GGCCGTAACG TGTGGGCAGC AGAGGTTGAC
CTGATTGTCG AGCGTATCGG TAGTGTTGCC CGAGACTTAG GAGCGCGCCT ATGGATTGGC
ACCTCCTGTT CACTGCTTCA CAGCCCTGTA GATTTAGAGG TGGAGACGAC GCTCACGCCG
ACGCTACGTC AGCAGCTCGC ATTTGCTAAG CAAAAGCTGT TGGAGCTGGC TAATGTGCGC
CAATTGCTGC TGGCGCCTGA GTCTGTCGCG GCCAAAGAGA TAGTTAACAC CTGTGTGGCA
CGCCGTGAGG CTAAGGCTCA GGCGGCGGAT GCTAAAGTGA TCGCCCGTGT CGCTGCGCTG
ATCCCAGCCG ACTATGAACG TGTGAGCGAA TTTACTGAGC GCCAAGCGGT GCAGCAGCGT
AAGTATCGTT TGCCATTACT GCCAACGACC ACTATTGGCT CATTCCCACA AACGCCTGCT
ATCCGTGGCT TACGTAGCCG TTGGCGCAAA GGGGAGCTAA GCGATGCTCA ATATACCGAG
CAGTTGCAGC AAGTGACCCG CGATACCATA GACCGTCAGC TCAAACTCGG TATCGATGTA
CTAGTTCATG GTGAGGCCGA GCGTAATGAC ATGGTGGAAT ACTTCGGCGA GCAGCTTGAA
GGCGTGGGCT TTACCAAAAA TGGTTGGGTG CAGAGTTATG GTTCTCGCTG CGTTAAGCCG
CCGTTGATTT ATGGTGATGT GAGCCGCCCT AAGGCTATGA CGGTTGAGTG GGCCGAATTC
GCCCAAAGCC TGACGGACAA ACCCGTCAAA GGCATGCTAA CTGGCCCTGT GACGATTCTA
CATTGGTCGT TTGCCCGTGA AGATATCAGC CGCGATACCA TTGCTACCCA ATTGGCGCTG
GCGATTCGTG ATGAAGTGGT GGATTTACAA AATGCAGGCA TTGGCATTAT CCAAATTGAT
GAGCCAGCTT TCCGCGAAGG TCTGCCATTA AAGCAAAGCG AGTGGCAAGC TTACTTAGAT
TGGGCGGTGA ATGCTTTTAA ACTGAGTGCG GCGGGGGTTG TGGATGAAAC CCAAATCCAC
ACCCATATGT GCTACAGCGA GTTTAACGAC ACGATTGCGG CCATTGCCGC CATGGATGCG
GATGTTATCA CCATCGAGAC CTCGCGTTCA CGCATGGAAC TGCTCAACGC CTTTGAAGAT
TTTGAATATC CAAATGAAAT TGGCCCAGGC GTTTACGATA TCCACTCGCC AAATACCCCA
AGTGTTGAGG CCATGGTGCA CCTTATCGAA AAAGCGGCGC AAAAAGTGCC TGTGCGCCAA
CTGTGGGTTA ACCCCGATTG CGGCCTTAAG ACCCGCACTT GGGATGAGGT AGAACCCGCA
CTGAAGAACA TGGTCGATGC GACCCGCGAA CTGCGTCGCC GCCTCGGCTA A
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| Protein sequence | MQLNSLGFPR IGRRRELKFA LEKYWRGEST QAELHEVAKE LRRTHWQWQV AAGIEQVPVG
DFAFYDQVLT LSATLNAIPD RHRGEGAIDL DTLFRVARGR APTGTDAPAS EMTKYFNTNY
HYLVPELKQD QVFSIAYEQF FDEVAEAQAL GYQAKPVLLG PVSYLYLAKT VGQDFDKLSL
LPNLLKAYAD ILARFAAQGV TWVQLEEPVL ALELAADWQA AISEAYQALK TAQVKILLTS
YYGSISHHQA LVSALPVAGL HLDLVTAPEQ LALFANALRP DQILSAGVVN GRNVWAAEVD
LIVERIGSVA RDLGARLWIG TSCSLLHSPV DLEVETTLTP TLRQQLAFAK QKLLELANVR
QLLLAPESVA AKEIVNTCVA RREAKAQAAD AKVIARVAAL IPADYERVSE FTERQAVQQR
KYRLPLLPTT TIGSFPQTPA IRGLRSRWRK GELSDAQYTE QLQQVTRDTI DRQLKLGIDV
LVHGEAERND MVEYFGEQLE GVGFTKNGWV QSYGSRCVKP PLIYGDVSRP KAMTVEWAEF
AQSLTDKPVK GMLTGPVTIL HWSFAREDIS RDTIATQLAL AIRDEVVDLQ NAGIGIIQID
EPAFREGLPL KQSEWQAYLD WAVNAFKLSA AGVVDETQIH THMCYSEFND TIAAIAAMDA
DVITIETSRS RMELLNAFED FEYPNEIGPG VYDIHSPNTP SVEAMVHLIE KAAQKVPVRQ
LWVNPDCGLK TRTWDEVEPA LKNMVDATRE LRRRLG
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