| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3260 |
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| Symbol | rpsF |
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| ID | 4253828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3891604 |
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| End bp | 3891999 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119900 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_735385 |
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| Protein GI | 113971592 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000012398 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000109167 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGTCATT ACGAAATCGT ATTTATGGTT CACCCAGATC AAAGTGAACA AGTACCTGGT
ATGATTGAGC GTTACACCGG TGTTATCACC GAAGCTAACG GCAAAATCCA CCGTTTAGAA
GATTGGGGCC GTCGTCAACT GGCTTACCCA ATCCAAGATC TGCACAAGGC TCACTACGTT
CTGATGAACG TTGAAGCACC AGCAGAGACG ATTGAAGAGC TAGAAACTGC TTTCCGTTTC
AACGACGCAG TTCTGCGTAA CATGGTAATG CGTACTAAAG TTGCCGTTAC TGAAGCATCT
CCAATGGCGA AAGCTAAAGA TGAGCGCGAT TCACGTCGTG GCCCAGCTGG CGACCGCTCA
TATGATGAAG CTAACGCTGA AGAAATCGCT GAGTAA
|
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| Protein sequence | MRHYEIVFMV HPDQSEQVPG MIERYTGVIT EANGKIHRLE DWGRRQLAYP IQDLHKAHYV
LMNVEAPAET IEELETAFRF NDAVLRNMVM RTKVAVTEAS PMAKAKDERD SRRGPAGDRS
YDEANAEEIA E
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