| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3166 |
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| Symbol | |
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| ID | 4253736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3785562 |
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| End bp | 3785957 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638119807 |
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| Product | invasion gene expression up-regulator, SirB |
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| Protein accession | YP_735293 |
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| Protein GI | 113971500 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3094] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACTT TTTACAGTCT TTATCCTGCT GTTAAGCACC TGCATTTAAC CTTAATTGCC
GTGAGTGTGC TGTTTTTTGT CGTTCGTTTT GTGTTGCATT TACGTCAGTC AGCACTGATG
GGCAAGAAAG TATTCAAAAT CGCGCCCCAT GTTATCGACA CTTTTTTACT GCTGTCGGGT
TTAACCCTGT GCTTTATGAT CAAGCAATAT CCTTTTGTGG ACCCTTGGTT GACCGAAAAG
ATTGGCGCCG TGCTCGCGTA TATTGCCTTG GGCGTGATTG CGATAAAAGC GAACAGAAAC
AAATTGTTCA AAGTTTTTGC CTTTTTAGGT GCATTAGGTT GGTTAGTTTA CGCCGCCAAA
TTGGCGCATT TTAAACAAGC GGTATTATTG GGTTAA
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| Protein sequence | METFYSLYPA VKHLHLTLIA VSVLFFVVRF VLHLRQSALM GKKVFKIAPH VIDTFLLLSG
LTLCFMIKQY PFVDPWLTEK IGAVLAYIAL GVIAIKANRN KLFKVFAFLG ALGWLVYAAK
LAHFKQAVLL G
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