Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3149 |
Symbol | |
ID | 4253720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3771009 |
End bp | 3771872 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119791 |
Product | sterol desaturase family protein |
Protein accession | YP_735277 |
Protein GI | 113971484 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCG CCGCGTTAAT CAATCACCCC GAGGTGTTGC TGCTGGTATT GGCTCCACTG TTTTTTGTCT GCATTTTGCT GGAATGGTAT TTCGGCGACA GAAGACAAAA ACTGCCAGTG AGTGCCCGTT ACCACACGAA GGAAGTGCTG TGTAATTTTA GTCTCGCCGC CATGCACCAA GGCACGGATA TCCTCACGGG TTTGTTGATC GCTAAGTTGT ACCTAGCGGT ATTTGGTTGG AAATTATTCG ATATTCAAAT GGGGCCACTC AGCTTTGTGC TGCTGATGAT TGCCCAAGAT TTTTGCTATT ACTGGTTCCA CCGTGCGAGC CATAGAGTGC GGTGGATGTG GGCGGCCCAT GTGGTGCACC ACAGCTCAGA AAATATGAAC TTTAGCACAG CGTTTCGCCA GAGTTTGATG TATCCCTTCG CTGGCATGTG GATATTTTGG TTGCCGCTGG TGATTTTAGG TTTTGATCCT AATTGGGTGG TATTTGTGGT ACTGCTAAAC TTGGGATTAC AGTTTTTTGT GCATACCCAA GCGATCAGAA AACTTGGTCC CTTAGAATGG CTGTTTAATA CGCCTTCCCA CCACAGGGTG CACCATGGGC GAAATCCACA ATATATCGAT AAAAATTATG CCGGTATTTT GATCATCTGG GACAAACTCT TCGGTACCTT TGTACCCGAG GGCGAGACAG TGATTTACGG GATCACTAAA CCTGTCAACA GTTTTAATCC ACTTAAAGTG ACCTTTAGCG AATGGCGCGA TATGTTCAGC GAGGTGACGG CGCGGGGGCT GACATTCACG GAGCGATGTA AAATCCTCTT CGCGCCTCCA GCCAGTCAGC AAAAGGATAA GTGA
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Protein sequence | MDIAALINHP EVLLLVLAPL FFVCILLEWY FGDRRQKLPV SARYHTKEVL CNFSLAAMHQ GTDILTGLLI AKLYLAVFGW KLFDIQMGPL SFVLLMIAQD FCYYWFHRAS HRVRWMWAAH VVHHSSENMN FSTAFRQSLM YPFAGMWIFW LPLVILGFDP NWVVFVVLLN LGLQFFVHTQ AIRKLGPLEW LFNTPSHHRV HHGRNPQYID KNYAGILIIW DKLFGTFVPE GETVIYGITK PVNSFNPLKV TFSEWRDMFS EVTARGLTFT ERCKILFAPP ASQQKDK
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