Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3123 |
Symbol | |
ID | 4253694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3738569 |
End bp | 3739303 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638119765 |
Product | hypothetical protein |
Protein accession | YP_735251 |
Protein GI | 113971458 |
COG category | [S] Function unknown |
COG ID | [COG3821] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.723349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.754695 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCT CGCTATTAGA TATTTCTGCA CTGACGTGGT TTATCGTTTC TTGGGCTGGC TATACAGCTT TTGCCCGACG TAAGGCGAAG GATACCGACT GTATTGCCCG TGGCCTGCAT AAGCACCGAA TTTACTGGAT GCTCGAGCTG ATGACTCGAG GCGTGCGCGT TGGCGATGCG GCGTTATTAG CGAACCTTGA GCGTAATATT GCCTTTTTTG CCTCAACCAC ACTGTTCGTG CTCGCGGGGG TATTAACCTT ATTTGCCCAA GTTGAACGCC TCGAAGCCGT GATCGCCACT ATTCCCTATG CTACGCCGCC GAACCACTCC TTAGTCCAAG TGAAGTTGGC GCTATTAGTG GTGATCTTCG TAATGGCGTT TTTCCAATTT ACCTGGTCGA TGCGCCAATA CGGCTTTGTG AACGTGATGA TAGGCGCAGG CCCCATGGAT AGCGAAGGCG CCAATGACAA CCTCAAAGCC TACGCGCGGC AAATGGCAAC GGTGCAAGAC CAAGCCGCCC ATTCCTATAA CTATGGCCTG CGGGCGTACT ACTTTTCGAT GGCCGTGCTC TGCTGGTTTG TGCACCCGAT ACTGTTTATT TTGGCTAGCC TGTTTGTGGT GGTCACCCTG TATCGCCGCG AATTTAAATC CCGCGCCGTA ATAGCCATTA CCGCCGCCAA GGCACATTTA GGCAGCGAAT ATCAGGCGCG AGAAAACCAG CGCCAATCTA AGTAG
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Protein sequence | MTFSLLDISA LTWFIVSWAG YTAFARRKAK DTDCIARGLH KHRIYWMLEL MTRGVRVGDA ALLANLERNI AFFASTTLFV LAGVLTLFAQ VERLEAVIAT IPYATPPNHS LVQVKLALLV VIFVMAFFQF TWSMRQYGFV NVMIGAGPMD SEGANDNLKA YARQMATVQD QAAHSYNYGL RAYYFSMAVL CWFVHPILFI LASLFVVVTL YRREFKSRAV IAITAAKAHL GSEYQARENQ RQSK
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