Gene Shewmr4_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3123 
Symbol 
ID4253694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3738569 
End bp3739303 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content52% 
IMG OID638119765 
Producthypothetical protein 
Protein accessionYP_735251 
Protein GI113971458 
COG category[S] Function unknown 
COG ID[COG3821] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.723349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.754695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCT CGCTATTAGA TATTTCTGCA CTGACGTGGT TTATCGTTTC TTGGGCTGGC 
TATACAGCTT TTGCCCGACG TAAGGCGAAG GATACCGACT GTATTGCCCG TGGCCTGCAT
AAGCACCGAA TTTACTGGAT GCTCGAGCTG ATGACTCGAG GCGTGCGCGT TGGCGATGCG
GCGTTATTAG CGAACCTTGA GCGTAATATT GCCTTTTTTG CCTCAACCAC ACTGTTCGTG
CTCGCGGGGG TATTAACCTT ATTTGCCCAA GTTGAACGCC TCGAAGCCGT GATCGCCACT
ATTCCCTATG CTACGCCGCC GAACCACTCC TTAGTCCAAG TGAAGTTGGC GCTATTAGTG
GTGATCTTCG TAATGGCGTT TTTCCAATTT ACCTGGTCGA TGCGCCAATA CGGCTTTGTG
AACGTGATGA TAGGCGCAGG CCCCATGGAT AGCGAAGGCG CCAATGACAA CCTCAAAGCC
TACGCGCGGC AAATGGCAAC GGTGCAAGAC CAAGCCGCCC ATTCCTATAA CTATGGCCTG
CGGGCGTACT ACTTTTCGAT GGCCGTGCTC TGCTGGTTTG TGCACCCGAT ACTGTTTATT
TTGGCTAGCC TGTTTGTGGT GGTCACCCTG TATCGCCGCG AATTTAAATC CCGCGCCGTA
ATAGCCATTA CCGCCGCCAA GGCACATTTA GGCAGCGAAT ATCAGGCGCG AGAAAACCAG
CGCCAATCTA AGTAG
 
Protein sequence
MTFSLLDISA LTWFIVSWAG YTAFARRKAK DTDCIARGLH KHRIYWMLEL MTRGVRVGDA 
ALLANLERNI AFFASTTLFV LAGVLTLFAQ VERLEAVIAT IPYATPPNHS LVQVKLALLV
VIFVMAFFQF TWSMRQYGFV NVMIGAGPMD SEGANDNLKA YARQMATVQD QAAHSYNYGL
RAYYFSMAVL CWFVHPILFI LASLFVVVTL YRREFKSRAV IAITAAKAHL GSEYQARENQ
RQSK