Gene Shewmr4_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3117 
Symbol 
ID4253688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3728765 
End bp3729589 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content48% 
IMG OID638119759 
ProductIon transport 2 domain-containing protein 
Protein accessionYP_735245 
Protein GI113971452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0962789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.861695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATA AAACCTCTTG GTCGCTCCGT TCTCTGGGTA ATCCATCTCC CTTCGAATTC 
GCTATGATGC TGCTGTCGCT GCTCTCAGTC ATCATAGTGC TGGTGATGAC CTTTGGCCGC
CTCGACAAAG AAACCTATCG GTTACTGTTT TTTATCGATA CCACGATTTG CATGATTTTT
ATGGTCAACT TTTTCATTGG CCTGTTTCGC GCTCGCGATA AAGTTTTTTA TCTGCGCCAT
CATTGGATTG ATTTTATCGC CAGCATCCCC GCCATCGAGG CGCTGCGAAT TGCGAGGGTA
TTTCAAATCC TGCGGGTGAT CCGTTTAATC CGCATGAGCC GCTCTTTCCT TATTCCATTG
ATAAAACAGC GTAAACAAGC CACTCTCGCC AGTTTACTGG TCGCTATGGT GACCATTTTA
ACCTTCGCCT CTATTATCAT TCTGATCGTC GAAAGCGGCA CAGAGGGCGC TAATATTCAA
ACCGCCGAGC AAGCCATTTG GTGGGCCTTA GTGACGATTT CAACCGTGGG TTATGGTGAT
TTCTATCCCG TCAGCACCGC AGGACATATT GTGGGTGGCA TAGTGATTGT CAGTGGCGTG
AGTTTTTTCG GGGTGATTTC GGGTTATATG GCGTCGGTAT TTGTCGCCCC CGATGAAAGC
GAGCGCCAAG AACGTCAAGA CGCCCATAAG GCAGAGATTA AAAGCGAACT CGAAATGGCT
CTTGCCAGAA TGGAAGAAAA CCAGCGGCAG ATGGAGCAAA ATCAGACGCA GATGTTGGCA
AAAATTGCCG AGTTAAAACA AGCACTAGAA GCGAAAAATA GCTAG
 
Protein sequence
MTDKTSWSLR SLGNPSPFEF AMMLLSLLSV IIVLVMTFGR LDKETYRLLF FIDTTICMIF 
MVNFFIGLFR ARDKVFYLRH HWIDFIASIP AIEALRIARV FQILRVIRLI RMSRSFLIPL
IKQRKQATLA SLLVAMVTIL TFASIIILIV ESGTEGANIQ TAEQAIWWAL VTISTVGYGD
FYPVSTAGHI VGGIVIVSGV SFFGVISGYM ASVFVAPDES ERQERQDAHK AEIKSELEMA
LARMEENQRQ MEQNQTQMLA KIAELKQALE AKNS