Gene Shewmr4_3103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3103 
Symbol 
ID4253674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3713857 
End bp3714294 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content49% 
IMG OID638119745 
ProductMerR family transcriptional regulator 
Protein accessionYP_735231 
Protein GI113971438 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTG GTGAATTATC CCAAAAGACC GGACTTGCGG CGTCGCGGAT CCGATTCTAC 
GAGCGCATTG GTTTACTCAA AGCGGTGAAG CGTAAAGCCA ATGGTTACCG CAGTTATCCC
CCTGAGGCAG TGATGGCACT CAAGATGATC ACCACGGGGC AACAGGCGGG ATTTAGCCTC
GATGAACTTC GTTTATTACT GCCAGCCGAT CTGGCCAACT GGGATCATCA GCATCTACTC
ACTACGCTGC GGCAAAAGGT CCACGATCTC GAAGAAATCG AGCGAAAAAT CGCGCTCAAT
AAGGCCAAGT TATTGGAGGT CTTAAGCGAA ATAGAGGCTA AACCCCAAGA TATGGACTGC
CAAACCAATG CGCAGCGGGT GATGTCTCAA TTCGGCTGGG ATATTTTACC CTCAAAATCA
CAACCCAAGA CCAAATAA
 
Protein sequence
MNIGELSQKT GLAASRIRFY ERIGLLKAVK RKANGYRSYP PEAVMALKMI TTGQQAGFSL 
DELRLLLPAD LANWDHQHLL TTLRQKVHDL EEIERKIALN KAKLLEVLSE IEAKPQDMDC
QTNAQRVMSQ FGWDILPSKS QPKTK