Gene Shewmr4_3097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3097 
Symbol 
ID4253668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3706764 
End bp3708284 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content49% 
IMG OID638119739 
Producthypothetical protein 
Protein accessionYP_735225 
Protein GI113971432 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATG CAATGTTTAT TGGTCTATCG ACCGCGTTTG AATTGCAAAA CCTCATGTAT 
GTAGTCTTAG GCTGCTTGGT CGGCACAGTG ATCGGTATGC TGCCGGGATT AGGGCCGATC
ACAGCGATCG CCTTGATGAT CCCTGTGACT TACAGTATTG GCCCCAGTTC AGGGATGATC
TTAATGGCGG GCGTGTACTA CGGCGCTATT TTTGGTGGGT CGACATCATC AATTCTGATC
AACGCCCCTG GCGTAGCAGG AACGGTTGCG ACGTCATTTG ATGGTTATCC AATGGCGCAA
AAAGGCATGG CGGGCAAAGC ATTAGCGATT GCGGCCTATG CTTCGTTTAC CGGCGGCACT
ATCGGCGCCA TTATGTTGAT GGTCGCGGCG CCATTATTAG CGCAAGTATC ACTGAGCTTT
CAATCGGGCG ATTATGTGGT CTTGATGTTC CTCGGTTTGA CGGCCATTGC AGCGTTTTCG
AATCGTGGCG ATTTCCTCAA GGCCATGATG ATGACTCACT TAGGTTTGTT ACTCTCATCA
GTGGGGATCG ATCCTTTCTC GGGGATGGAA CGCTTCACCT TCGGTCAGCC AGATTTACTC
GATGGCATCA GTTTTCTGTT AATCGCTATG GCGACTTTTG CCCTGTCGGA AGCGTTAATG
AATGTGATTA AGCCGCCGAA GTCGACCGAA AACATCAACT TTTCGGCGCA GCCGATTGGC
AGCACTCGCT TAACCAAAGA GGAAGTAAAA GAGATAGCGC CTGTGATTGG TCGCTCGTCG
ATTTTCGGTT TTTTGATTGG GGTATTACCG GGCGCAGGCG CAACGATTGC CAGCTTTATG
GCCTACGGCA CTGAGCGTAA TTTATCCCGC GGCGCGAAAC GCGATGAGTT TGGTAAGGGC
TCGATTCGCG GTGTTGCGGC GCCTGAGTCG GCTAACAATG CGGCCTGTAC TGGCTCATTT
GTACCCTTAT TGACCTTAGG TATTCCGGGG TCGGGTACCA CGGCGATCAT GCTTGGTGCA
TTGATCGCTT ATGGTATTCA ACCTGGCCCT ATGTTGATGC AAGAGCGTCC AGACGTGTTT
TGGTCTGTGA TTATCTCTAT GTATTTCGGC AATATTATTC TGCTGGTACT GAATTTACCG
CTGATCCCTT ATTTTGCCAA AGTGCTGGCT TTGCCTAAGT CGATTCTGAC TGTAATGATT
TTGTTCTTCA GTTTGATTGG GGTGTATTTA GTCTCATTTA ATACCTTTGA TCTGTTCTTG
ATGATAGGTT TTGCGATTGT CGCTGTGGTG CTACGTTTGC TGGCATTTCC GATGGCGCCG
CTGCTACTGG GCTTCATCCT CGGTGATATG ATTGAGCGTA ACTTCCGCCG TGCTATGATC
GCTTCCGATG GTTCTTTGAG CTTTCTGTGG GAACGCCCGC TAACACTGAC TATCTTGATT
GTGGCAATCG CTATGCTGGC TGTGCCATTG ATCGGTTTTA TTCGTAGTCA TCGTAGTGAT
AAATTGGCGA AAGCCTCTTA A
 
Protein sequence
MFDAMFIGLS TAFELQNLMY VVLGCLVGTV IGMLPGLGPI TAIALMIPVT YSIGPSSGMI 
LMAGVYYGAI FGGSTSSILI NAPGVAGTVA TSFDGYPMAQ KGMAGKALAI AAYASFTGGT
IGAIMLMVAA PLLAQVSLSF QSGDYVVLMF LGLTAIAAFS NRGDFLKAMM MTHLGLLLSS
VGIDPFSGME RFTFGQPDLL DGISFLLIAM ATFALSEALM NVIKPPKSTE NINFSAQPIG
STRLTKEEVK EIAPVIGRSS IFGFLIGVLP GAGATIASFM AYGTERNLSR GAKRDEFGKG
SIRGVAAPES ANNAACTGSF VPLLTLGIPG SGTTAIMLGA LIAYGIQPGP MLMQERPDVF
WSVIISMYFG NIILLVLNLP LIPYFAKVLA LPKSILTVMI LFFSLIGVYL VSFNTFDLFL
MIGFAIVAVV LRLLAFPMAP LLLGFILGDM IERNFRRAMI ASDGSLSFLW ERPLTLTILI
VAIAMLAVPL IGFIRSHRSD KLAKAS