| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3090 |
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| Symbol | |
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| ID | 4253661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3697743 |
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| End bp | 3699299 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119732 |
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| Product | anaerobic nitric oxide reductase transcription regulator |
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| Protein accession | YP_735218 |
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| Protein GI | 113971425 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000341917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTTA GTCAAACCGA CCTTACCCGT ATCGCTCTGG ATATCACCTC AGGTTTAGCC
CACAGGGACC GCTTCTCACG CTTGCTCGAT ACGGTGAGAG CTAACCTGCA CTGTGACGCG
GCTGCGCTCC TCACCTTCCA TGGACACTAT TTTACCCCGC TGGCCATCGA CGGTTTGAAC
GAGGATGTAC TCGGCAGACG CTTTATCCTG AATGAGCATC CAAGGCTTGA GGCCATTGCC
CGTGCGGGGG ATATAGTGCG TTTTCCCGCC GACAGTGAAC TTGCCGATCC CTACGATGGT
TTGATCCCCA ATCAAACAGG GGCATTGAAA GTCCATGCCT GTATCGGACT GCCTTTATTT
GCCGACGAGC AGCTTATCGG TGCCGTAACT ATCGATGCCT TTAATCCCCT ACAGTTCGAT
CAATTCAGCA ATACTGAGCT TCGCAGCTTA AGTGCGATTG CCGCCGCATC CTTAAGCAAC
GCCCTGCTAG TTGAAAAGTT GGAGCGCATG GCGCTCAATA GCCACTCGAC TCATGTGCAG
GAAAAAAGCC CCAACCTTAA CCACGATGCC GAAATCATCG GTAACTCGCC CCAGATGCAA
AGCTTGAATC GAGAGATAGA AGTTGTTGCC CATAGCGACC TTAACGTACT GATTTTAGGC
GAGACTGGAA CAGGCAAAGA ATTAGTTGCA CAGGCAATCC ATCAAAAATC CGCGAGACAG
CACAAACCCT TGGTTTATCT CAATTGCGCA GCGCTTCCTG AATCGGTTGC CGAAAGCGAA
CTCTTTGGCC ATATCAAAGG CGCGTTTACC GGCGCCATCA GCCATCGCAG TGGCAAGTTT
GAAATGGCCG ATAAGGGCAC ACTCTTTCTC GATGAGATTG GCGAGCTTCC GCTCACGCTT
CAGGCCAAGT TGTTGCGGGT ATTACAATAT GGCGATATTC AAAAAGTGGG GGATGATCGC
AGTCTTAAAG TCGATGTGCG TATCATTGCC GCCACCAATA AGGATCTGAA GACAGAGGTG
CTGGCTGGTC GCTTTAGGGC CGATCTCTAC CATAGATTAA GTGTGTTCCC CCTGCTGGTG
CCGCCCCTGC GGGAGCGTGA GCAGGACATC ACCTTGTTGA GCGGATTCTT CGCCGAGCGA
TATCGGCAAA AGCTGGGGAT GAAGCAGCTT AACTTCAGCC CCAGTAGCTT AATGTTGCTC
AATCAATATG CATGGCCGGG CAATGTGCGC GAGCTCGAGC ACGCCATTCA CAGGGCAACC
GTACTGGCGC GCGTCTCGGC ACAGGATGGC TGCTGCACCA TAGCGCCACA ACATTTTGAT
TTACCGTTTA AACAAAGCTC TGTAGAGACA AACGCATCGA CAAGCTTAAG CGTAAACGAT
ATGCAGCTTC GCCCGTTAGA AGGTGCCAGT TTAGCCCAAG CGACCGACGC CTTTCAGCGT
GACTTCATCA AACAAGTACT CACTGCACAT AATGGCAATT GGGCCGCCTC GGCCAGAGCC
TTAGGACTCG ACCCAGGCAA TCTGCATCGC CTCGCAAAAC GCTTAAGGCT AAAATAA
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| Protein sequence | MALSQTDLTR IALDITSGLA HRDRFSRLLD TVRANLHCDA AALLTFHGHY FTPLAIDGLN
EDVLGRRFIL NEHPRLEAIA RAGDIVRFPA DSELADPYDG LIPNQTGALK VHACIGLPLF
ADEQLIGAVT IDAFNPLQFD QFSNTELRSL SAIAAASLSN ALLVEKLERM ALNSHSTHVQ
EKSPNLNHDA EIIGNSPQMQ SLNREIEVVA HSDLNVLILG ETGTGKELVA QAIHQKSARQ
HKPLVYLNCA ALPESVAESE LFGHIKGAFT GAISHRSGKF EMADKGTLFL DEIGELPLTL
QAKLLRVLQY GDIQKVGDDR SLKVDVRIIA ATNKDLKTEV LAGRFRADLY HRLSVFPLLV
PPLREREQDI TLLSGFFAER YRQKLGMKQL NFSPSSLMLL NQYAWPGNVR ELEHAIHRAT
VLARVSAQDG CCTIAPQHFD LPFKQSSVET NASTSLSVND MQLRPLEGAS LAQATDAFQR
DFIKQVLTAH NGNWAASARA LGLDPGNLHR LAKRLRLK
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