| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3089 |
|---|
| Symbol | |
|---|
| ID | 4253660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 3695264 |
|---|
| End bp | 3697549 |
|---|
| Gene Length | 2286 bp |
|---|
| Protein Length | 761 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638119731 |
|---|
| Product | putative nitric oxide reductase (subunit B) transmembrane protein |
|---|
| Protein accession | YP_735217 |
|---|
| Protein GI | 113971424 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3256] Nitric oxide reductase large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0963858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAC AAAAACTCAC CGCTATCGCA CTGTTAGTTG TGCTGATTGC TTCATTCACT
GTCCTGCTGA GCATAGGCAG TGAAATCTAT CGGGAAAAAC CGCCGATACC CAATGCATTT
ACCGATGTGA ATGGTCAGGT TATCTACAGC GAAAATGATA TCGAACAAGG CCAATTGGTC
TGGCGCTCCA TGGGCGGCCA TCAACTGGGG TCGGTTTGGG GACATGGCTC TTATGTTGCC
CCAGATTGGA CCGCCGACTG GTTACACAGA GAAGCCGAAG CTTGGCTCGA TATTCGCGCA
GAGCAGCAAT ATAAAACGCC TTTCGCCCAA TTAAACTCCC AACAAAAGGC AGGGCTTGAG
CAGGCATTAA GGGAAGATTT ACGCCATAAC AGCGTCGAGC CACAGGCCGA TGGCACAGTG
CTTATTCGCT TGTCTAGCAC TCGTATCGAA GCGATTAACA GGGTCGAGCA GCATTATTTA
TCCCTGTTTG GGAGCGATCC AGAGCTTAGC AATCTTCGTG AACAATACGC CATGAAAGAG
GGCACAGTGC CCGATCTTGC CCGCCGCGAA CAACTCAATG CGTTTCTCTT TTGGGGAGCC
TGGGCGGCAA TCACTGAACG CCCCGATGCC CCCTATACCT ACACCAATAA CTGGCCCTTC
GATCCCCAGT TAGGCAATAC ACCGACCTCG GATAATATCG TCTGGTCGAT ACTCAGTATT
GTGACCCTAA TTGCGGGGAT TGGCGGATTG ATCTGGCACC ATGCGAGCGG CAAACATGAA
AGCCTGCCCA AGCCTTCGGA GCAAGATCCG CTGTTTTTCA CTAAACCAAC CGCCTCACAA
AAAGCCGTCG GCAAATACTT CATCACGGCA ATTGGTCTGT TTTTACTGCA AATTTTACTC
GGCGGGATCA CTGCCCACTA TGCGGTAGAA GGCCAAGAGT TTTACGGTTT ACCAATTTCA
GAAATACTGC CCTACTCTGT CACTCGCACC TGGCACACCC AATTAGCGGT ATTTTGGATT
GCCACGGCCT GGTTAGGCAC AGGGCTATAT ATTGCTCCCG CCTTATCGGG TTATGAGCCG
AAATATCAAC GTCTTGGCGT TAACGTACTC TGGGTAGCCT TAGTCGTCGT AGTGCTTGGC
TCGATGGCGG GCGAATGGAT TGGGGTACAG CAGTATTTTG ACCTCGATAT GAACTTCCTC
TTTGGTCACC AAGGATATGA ATACATAGAT CTTGGCCGAG TATGGCAAAT CTTACTCCTC
GTCGGATTAC TGATTTGGCT TGCCTTAGTC ACCGCCGCCA TCAAACCCGC CCTCAAAGTG
CAAGGCGAAA TGCGCCCTGT TATTTGGGTA CTCTATGCCT CCTGCGTGGC GATTGGTTTG
TTCTATGGCG CCGGCCTCTT TATGGGTAAA CACGCCAATT TAGCGATTGC AGAATACTGG
CGTTGGTGGG TAGTACACCT GTGGGTTGAG GGCTTCTTCG AAACCTTTGC CACTGCCGTT
ATCGCCTTGA TGTTAGTACG TTTAGGGTTA ATCCGCGGCC GCAGTGCCAA CGGCGCCGTG
TTATTTACAA CGGTGATCTT CTTAACCGGT GGCTTGATTG GCACCCTACA CCACCTCTAC
TTTACAGGCA CACCGACCTC GGTGATTGCC TGGGGCGCCA TCTTCTCCGC CTTAGAAGTT
GTTCCCCTCG CCATTATTGG TTTCGAAGCC ATGGAAACCT ACCGCCTGCG TAAAGCCAGT
GGCTGGATGC AACGTTATCA CTGGGCGATT ATGTTCTTTG TGGCTACCGC GTTTTGGAAC
TTGGTCGGTG CCGGTATGCT GGGCTTCTTA ATCAATCCAC CTATCTCGCT CTATTACATT
CAAGGATTAA ACACCACGGC CACCCATGGT CACGCCGCCT TTATGGGGGT TTACGGTATG
CTCGGCATGG GCTTGATGCT CTTCTGTCTG CGAGGCCTCA CAGGTAATAT GCAGTGGAAT
GACAAAATGC TCAAAGGCGC CTTCTGGTGC CTCAATATTG GCCTAGCGGC TATGGTGTTC
ATGTCGTTAT TACCCGTAGG GATTACGCAG TTTTTTGCGG TCATCGACCA TGGATATTGG
TTCGCCCGTT CGCCAGAAGT GATCCATAGT CCGCTGGTTG AAAGGCTGGT TTGGATGCGC
ATGTTTGGGG ATGTCATCTT CAGTATCGGC GGTCTCTTAA TGGGCGCCTT CTTGCTCGAT
TTGATCAGAA AAGCCCTGAA TAAACCTGCC AAAGTGCAAC AGGAAGTCTT ACAAACAAAT
CACTAA
|
|---|
| Protein sequence | MSKQKLTAIA LLVVLIASFT VLLSIGSEIY REKPPIPNAF TDVNGQVIYS ENDIEQGQLV
WRSMGGHQLG SVWGHGSYVA PDWTADWLHR EAEAWLDIRA EQQYKTPFAQ LNSQQKAGLE
QALREDLRHN SVEPQADGTV LIRLSSTRIE AINRVEQHYL SLFGSDPELS NLREQYAMKE
GTVPDLARRE QLNAFLFWGA WAAITERPDA PYTYTNNWPF DPQLGNTPTS DNIVWSILSI
VTLIAGIGGL IWHHASGKHE SLPKPSEQDP LFFTKPTASQ KAVGKYFITA IGLFLLQILL
GGITAHYAVE GQEFYGLPIS EILPYSVTRT WHTQLAVFWI ATAWLGTGLY IAPALSGYEP
KYQRLGVNVL WVALVVVVLG SMAGEWIGVQ QYFDLDMNFL FGHQGYEYID LGRVWQILLL
VGLLIWLALV TAAIKPALKV QGEMRPVIWV LYASCVAIGL FYGAGLFMGK HANLAIAEYW
RWWVVHLWVE GFFETFATAV IALMLVRLGL IRGRSANGAV LFTTVIFLTG GLIGTLHHLY
FTGTPTSVIA WGAIFSALEV VPLAIIGFEA METYRLRKAS GWMQRYHWAI MFFVATAFWN
LVGAGMLGFL INPPISLYYI QGLNTTATHG HAAFMGVYGM LGMGLMLFCL RGLTGNMQWN
DKMLKGAFWC LNIGLAAMVF MSLLPVGITQ FFAVIDHGYW FARSPEVIHS PLVERLVWMR
MFGDVIFSIG GLLMGAFLLD LIRKALNKPA KVQQEVLQTN H
|
|---|
| |