Gene Shewmr4_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3056 
Symbol 
ID4253627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3654857 
End bp3655261 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content40% 
IMG OID638119698 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_735184 
Protein GI113971391 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00204984 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00341554 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCTTG ATGGCGGATG CTTATGCGGA AAATTACGAT ATTCAATTGA TGCAATCCCA 
ATTGATGCTG GATTTTGTCA TTGTAAAATT TGTCAGAAAG CCAATGGCGC TCCCATGGTA
GCTTGGTTAA CGATTCCCTT TTCTGGTTTT TTATACACAA GTGGTGATGC TGCTATATAT
GCTTCAAGTC AAAAATATCA GAGGGAGTTC TGTCGTTATT GTGGTTCACA GATAGCTTTT
AGGGCGACAG TTGAGCCAAA AACTATAGAT ATCACAATAT GTACGTTAGA CGAGAGTTCA
AAAGTCGAGC CTCAGTACCA CATATGGTGT CAAAGCAAAG TGAACTGGTT ACATTTAAAT
GATGAGCTCC CACAGTTTTT GGATTCAGGT CCAGACGGCC CCTAA
 
Protein sequence
MKLDGGCLCG KLRYSIDAIP IDAGFCHCKI CQKANGAPMV AWLTIPFSGF LYTSGDAAIY 
ASSQKYQREF CRYCGSQIAF RATVEPKTID ITICTLDESS KVEPQYHIWC QSKVNWLHLN
DELPQFLDSG PDGP