Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3029 |
Symbol | |
ID | 4253600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3622658 |
End bp | 3624118 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119671 |
Product | catalase |
Protein accession | YP_735157 |
Protein GI | 113971364 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0753] Catalase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.590786 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAC AGTATTTAAC AAGCCAAAGC GGTTCTCCAA TTGCTGACGA TCAAAACTCA TTGTCAGCGG GTGAGCGTGG TCCCTTACTA CTGCAAGATT GGCATTTAAT TGAAAAGCTT GCCCACTTTA ACCGTGAGCG TATTCCTGAG CGTGTTGTGC ATGCGAAAGG GACTGGCGTA TACGGTACTT TCACCCTGAC TAAAGACTTA AGCGAATACA CCATCGCCGA CCACTTTAAC GGTGTGGGTA AGCAAACTGA GACCTTCGTG CGCTTCTCTA CCGTGGGTGG TGAAATGGGC TCTGCCGATG CCGAGCGCGA TCCCCGTGGT TTTGGTCTGC GCTTCTATAC CGCCCGTGGT AACCACGATA TCGTGGGTAA CAACACGCCG ACCTTCTTCC TGCGTGATGG TATTAAGTTC CCAGACTTTA TCCATACCCA AAAGCGTAAC CCATTGACGA ATTTGAAAGA TCCACAAGCT ATGTGGGACT TCTGGTCATT AAACCCTGAA GCCATGCACC AAGTGACGAT TCTGATGTCT GACCGTGGTA TTCCGGCAAA CTACCGCCAA ATGCATGGTT ATGGTTCGCA TACTTTCTCG TTCTGGAATG CTAAAGGTGA GCGTTTCTGG GTGAAGTTCC ACTTCAAATC GCAGCAAGGC GTGGTGAACT TAACCAATGA GCAAGCCGAT AAGTTAAAGG GTATCGACCC TGACTCATCC CAGCGCGATA TGGTGGTAGC TGTGACCGAC GGTAACTTCC CTCGTTGGAC GGTGAACGTA CAGATTATGC CTGAGGCCGA TGCCAACACT TACCATATCA ACCCATTCGA TTTAACTAAG GTGTGGCCAC ATGGCGATTA CCCGTTAATT GAAATTGGTG TGTTAGAGCT GAATCGTTTA CCGCAAAACT ACTTTGCCGA AGTCGAGCAA GTGGCATTAG CACCGAGCAA CTTAGTACCA GGTGTGGGCG CATCGCCCGA CAAGATGTTG CAGGCGCGTT TATTCGCCTA TGCCGATGCG CAGCGTTACC GAATTGGGGC GAACTACAAC CAGTTACCAG TCAACTGCCC ACATGCGACT AAAGCCAACC ATCACCAACG TGCGGGTGCC ATGGCGGGAA CACAATGCCC ATACCACGGT AGTCAAACCG GTGGCGATGC CGCGGCTAAC TATGGTCCAA ACAGCACTGC GGGTGCTTTA GTTGAACCGG CAAACTTTGC CGAGCCACCA CTGCGTTTAG ATGGCGAAGC GGCGCGTTAC AGCCGTTACA ATCAGGATGA TTACACTCAG GCGGGTAATT TGTATCGCAT CTTCAGCGAA GCCGAGAAGG CACGCTTAGT GGAAACGATT TCTGGCTCAC TGCGTCAGGC AAGTGTAGAG GTACAGCAAC GTATGCTGGC ACATTTCCAC AAAGCCGATG CTGATTACGG TCAACGTATC CAAACTGCAC TCGGGTTATA A
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Protein sequence | MSQQYLTSQS GSPIADDQNS LSAGERGPLL LQDWHLIEKL AHFNRERIPE RVVHAKGTGV YGTFTLTKDL SEYTIADHFN GVGKQTETFV RFSTVGGEMG SADAERDPRG FGLRFYTARG NHDIVGNNTP TFFLRDGIKF PDFIHTQKRN PLTNLKDPQA MWDFWSLNPE AMHQVTILMS DRGIPANYRQ MHGYGSHTFS FWNAKGERFW VKFHFKSQQG VVNLTNEQAD KLKGIDPDSS QRDMVVAVTD GNFPRWTVNV QIMPEADANT YHINPFDLTK VWPHGDYPLI EIGVLELNRL PQNYFAEVEQ VALAPSNLVP GVGASPDKML QARLFAYADA QRYRIGANYN QLPVNCPHAT KANHHQRAGA MAGTQCPYHG SQTGGDAAAN YGPNSTAGAL VEPANFAEPP LRLDGEAARY SRYNQDDYTQ AGNLYRIFSE AEKARLVETI SGSLRQASVE VQQRMLAHFH KADADYGQRI QTALGL
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