Gene Shewmr4_2919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2919 
Symbol 
ID4253490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3486698 
End bp3488053 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content49% 
IMG OID638119555 
ProductL-glutamine synthetase 
Protein accessionYP_735047 
Protein GI113971254 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000934315 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.778941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC TAATCGCTTT TTTAAAAGAA CGAAAAATCA CAGAAGTCGA ATGTGTTATC 
AGCGATATGA CAGGTATCGC CCGCGGAAAA ATTGCCCCAG TGGATAAATT CCTCGATGAA
AAAGGCATGC GTTTACCCGA AAGCGTGTTG CTGCAAACCG TGACCGGTGA CTTTGTTGAC
GATGATATTT ATTACAGTTT GCTCGACGAC GCCGACATCG ATTTTGTCTG TGTCCCCGAT
GAAAATGCCG TGTTTATGCT GCCTTGGACC ATTGAAGCCA CAGCTCAAGT GATCCACGAT
TGCTACGACA GAATGGGCAA TCCCATCGAA TTATCGCCAC GTAACGTGTT GAAGAAAGTG
CTTTCGCTAT ACGAGCAAAA AGGCTGGGAG CCAGTTATTG CACCTGAGAT GGAGTTTTAT
CTCACCAGCC GTAGCGATGA CCACGATTTA CCCCTTAAGC CACCTATTGG TCGCTCGGGC
AGACCCGAAG CGGGACGTCA GTCTTTCTCG ATTGATGCGG CTAACGAATA CGACCCGCTT
TTCGAAGATA TGTACGACTG GTGCGAGCTG CAAGGTTTAG ATATCGATAC GCTGATCCAC
GAAGACGGCC CAGCGCAAAT GGAGATTAAC TTCAGCCATG GTAATCCATT ATCTCTTGCG
GATCAGGTGT TTGTATTCAA GCGTACCCTG CGTGAGGCGG CATTAAAGCA CAATGTGTGC
GCCACCTTTA TGGCTAAACC TGTGACCGAT GAGCCTGGCA GTGCCATGCA CATTCATCAA
AGCGTGATTA ATAAGGAAAC AGGCAAAAAC ATCTTCACCA ATGAAGACGG TACTCAAAGC
CCATTATTCC TGAGCTATAT CGCTGGTTTA CAGAAGTTTA TTCCTGAACT CTTGCCGTTG
ATGGCTCCTA ATGCCAACTC GTTCCGCCGT TTCTTACCGG GCACCTCTGC GCCAGTAAAC
TTGGAATGGG GCGTTGAGAA CAGAACCTGC GGCCTGCGTA TTCCTGAGTC TTCACCGCAA
AACCGCCGCA TTGAAAACCG TATTCCTGGG GCGGATGCAA ACTGCTATTT AGCCATCGCG
GCGAGCTTAC TCTGCGGTTA CATCGGTATG GTGGAAGGGT TAAAACCTTC GACACCAGTA
CAGGGTAAAT CGAACGAAAG CCGTAGCAAC AATCCACATT GCCTGCCGTT GACCTTAGAA
GAAGCGTTAG CGGCGATGGA AGAGAGTGAT GCCTGTAAGG AATATTTAGG TGAAGCCTTT
ACTACCGGCT TTGTGGCGGT CAAACAGGCC GAGCTTGAAA ACTTCCGCCG TGTCGTGAGT
TCGTGGGAGC GTGAGTTCCT GTTACTCAGT GTGTAA
 
Protein sequence
MNKLIAFLKE RKITEVECVI SDMTGIARGK IAPVDKFLDE KGMRLPESVL LQTVTGDFVD 
DDIYYSLLDD ADIDFVCVPD ENAVFMLPWT IEATAQVIHD CYDRMGNPIE LSPRNVLKKV
LSLYEQKGWE PVIAPEMEFY LTSRSDDHDL PLKPPIGRSG RPEAGRQSFS IDAANEYDPL
FEDMYDWCEL QGLDIDTLIH EDGPAQMEIN FSHGNPLSLA DQVFVFKRTL REAALKHNVC
ATFMAKPVTD EPGSAMHIHQ SVINKETGKN IFTNEDGTQS PLFLSYIAGL QKFIPELLPL
MAPNANSFRR FLPGTSAPVN LEWGVENRTC GLRIPESSPQ NRRIENRIPG ADANCYLAIA
ASLLCGYIGM VEGLKPSTPV QGKSNESRSN NPHCLPLTLE EALAAMEESD ACKEYLGEAF
TTGFVAVKQA ELENFRRVVS SWEREFLLLS V