| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2916 |
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| Symbol | |
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| ID | 4253487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3482783 |
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| End bp | 3483688 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638119552 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_735044 |
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| Protein GI | 113971251 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0057841 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.437411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGA AGTCAAAACT AAAATGGCTT AAGGGACGTT TCTGGACGAT TAGCTTCCCC
TACGCTTGGC TGTTGTTGTT CTTCGCCTTG CCCTTTGCCA TTGTCCTTAA GATCAGTTTT
TCGACGGCGG CGATTTCGAT TCCGCCCTAC GAGGCGACCT TCCAATATGC GGATGATGTA
TTAAACATCT TCCTGCATTT AGGTAACTAT TTGATGTTAC TTGATGATTC GCTGTATTAC
ACCGCGTATC TCAGTTCATT AAAAATGGCG CTTATTTCGA CCATTGGCTG TTTGATCATT
GGTTATCCCA TGGCCTATGC CATTGCCCGT GCGCCAGCAA GGTTGCAAAC CGTGCTGTTG
TTATTGGTGA TGTTACCTTC TTGGACCTCG TTCTTAATCC GCGTTTATGC CTGGATGGGG
ATCTTAAGTA ACACGGGGAT TATCAATAAC ACATTGATGT GGTTAGGAGT CATTTCTGAG
CCATTGCAAA TCTTAAACAC TAACATCGCC GTTTATATCG GGATTATCTA CGCCTATTTG
CCCTTTATGA TTTTGCCGCT GTACGCGACC TTAGTGAAGT TAGATATGAG CCTGATTGAG
GCTGCATCTG ACTTAGGGTC GAGCCGTTTA AATACCTTCT GGAAAATCAC TTTCCCGTTA
TCGAAGAGCG GGGTGATTGC AGGTTCTATG CTGGTGTTTA TTCCTGCGGT AGGGGAGTTT
GTGATCCCTG AGTTGCTCGG CGGCCCAGAT TCTCTGATGA TAGGTAAAGT GCTGTGGCAG
GAGTTCTTCA ATAACCGTGA CTGGCCTGTG GCCTCATCTC TGGCGATTGT GATGCTGGCA
CTCTTGATTA TTCCTATTAC CTTATTCCAT CGCTATCAGG CGCGTAGTTT GGAGAAAGAC
CTATGA
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| Protein sequence | MKMKSKLKWL KGRFWTISFP YAWLLLFFAL PFAIVLKISF STAAISIPPY EATFQYADDV
LNIFLHLGNY LMLLDDSLYY TAYLSSLKMA LISTIGCLII GYPMAYAIAR APARLQTVLL
LLVMLPSWTS FLIRVYAWMG ILSNTGIINN TLMWLGVISE PLQILNTNIA VYIGIIYAYL
PFMILPLYAT LVKLDMSLIE AASDLGSSRL NTFWKITFPL SKSGVIAGSM LVFIPAVGEF
VIPELLGGPD SLMIGKVLWQ EFFNNRDWPV ASSLAIVMLA LLIIPITLFH RYQARSLEKD
L
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